RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ANKRD37Q7Z713 158 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 CENPLQ8N0S6 344 aaPredicted RBP17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 TCAIMQ8N3R3 496 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 CISD2Q8N5K1 135 aaKnown RBP17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 PLPP5Q8NEB5 264 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 CATSPER1Q8NEC5 780 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 TRPV3Q8NET8 790 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 BRIX1Q8TDN6 353 aaKnown RBP17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 PPP4R1Q8TF05 950 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 TM9SF4Q92544 642 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 ATOH8Q96SQ7 321 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 RBCK1Q9BYM8 510 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 NT5DC2Q9H857 520 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 DNAJC11Q9NVH1 559 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 WWOXQ9NZC7 414 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 GPRC5BQ9NZH0 403 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 ZNF490Q9ULM2 529 aaPredicted RBP17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 PCDHGA10Q9Y5H3 936 aa17.29■□□□□ 0.36
SMARCAL1-205ENST00000425815 FLNCQ14315 2725 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 H2AFYO75367 372 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 CDC123O75794 336 aaPredicted RBP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 C2P06681 752 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 CYC1P08574 325 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 LTA4HP09960 611 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 CTAGE8P0CG41 777 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 ITGAMP11215 1152 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 MTHFD2P13995 350 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 TFEBP19484 476 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 IL10P22301 178 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 GNLYP22749 145 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 IRF9Q00978 393 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 MFAP5Q13361 173 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 SLBPQ14493 270 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 LINC00696Q6ZRV3 163 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 CTAGE4Q8IX94 777 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 GALNT11Q8NCW6 608 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 DNAJB14Q8TBM8 379 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 STAG3L4Q8TBR4 150 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 IFT81Q8WYA0 676 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 WDR34Q96EX3 536 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 GPR78Q96P69 363 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 OR1F2PQ96R84 312 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 BARD1Q99728 777 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 CDC42EP4Q9H3Q1 356 aaKnown RBP17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 ACSS3Q9H6R3 686 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 NMRAL1Q9HBL8 299 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 RIC8BQ9NVN3 520 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 CD274Q9NZQ7 290 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 PTGFRNQ9P2B2 879 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 RNF112Q9ULX5 631 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 NTNG1Q9Y2I2 539 aa17.28■□□□□ 0.36
SMARCAL1-205ENST00000425815 NBASA2RRP1 2371 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 TCP11X1B4DZS4 312 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 SEC24DO94855 1032 aaPredicted RBP17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 AGTR2P50052 363 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 DOC2AQ14183 400 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 TOR1AIP1Q5JTV8 583 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 MFSD4BQ5TF39 518 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 IRAK1BP1Q5VVH5 260 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 B3GNTL1Q67FW5 361 aaPredicted RBP17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 ADNP2Q6IQ32 1131 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 TMIGD1Q6UXZ0 262 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 RIPOR1Q6ZS17 1223 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 ABHD13Q7L211 337 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 ATCAYQ86WG3 371 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 SIRT6Q8N6T7 355 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 EFCAB3Q8N7B9 438 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 MNS1Q8NEH6 495 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 KCTD4Q8WVF5 259 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 METTL21AQ8WXB1 218 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 TSLPQ969D9 159 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 TUBB6Q9BUF5 446 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 CAPS2Q9BXY5 557 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 CD244Q9BZW8 370 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 ILKAPQ9H0C8 392 aaPredicted RBP17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 EHD1Q9H4M9 534 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 CNOT10Q9H9A5 744 aaKnown RBP17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 SNX15Q9NRS6 342 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 ASF1BQ9NVP2 202 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 PLA2G3Q9NZ20 509 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 ACOT9Q9Y305 439 aa17.27■□□□□ 0.36
SMARCAL1-205ENST00000425815 COL12A1Q99715 3063 aa17.27■□□□□ 0.35
SMARCAL1-205ENST00000425815 LRIT2A6NDA9 550 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 FAM227AF5H4B4 570 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 UBXN8O00124 270 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 KERAO60938 352 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 VPS4BO75351 444 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 ALDOAP04075 364 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 FHP07954 510 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 HNRNPH1P31943 449 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 GLRBP48167 497 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 UBAP2LQ14157 1087 aaKnown RBP17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 E2F2Q14209 437 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 TBC1D1Q86TI0 1168 aaPredicted RBP17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 IQCKQ8N0W5 287 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 SNX31Q8N9S9 440 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 EXT2Q93063 718 aa17.26■□□□□ 0.35
SMARCAL1-205ENST00000425815 TBC1D20Q96BZ9 403 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms