RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 GPS1Q13098 491 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CTBP1Q13363 440 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RCN2Q14257 317 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 BBS9Q3SYG4 887 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DEFB134Q4QY38 66 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HECTD2Q5U5R9 776 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DUPD1Q68J44 220 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CYHR1Q6ZMK1 362 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 VN1R4Q7Z5H5 301 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SIAH3Q8IW03 269 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GPALPP1Q8IXQ4 340 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CPNE9Q8IYJ1 553 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CYP4Z2PQ8N1L4 340 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CPSF7Q8N684 471 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR5M3Q8NGP4 307 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CREB3L4Q8TEY5 395 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SNF8Q96H20 258 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MACROD1Q9BQ69 325 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SLC6A16Q9GZN6 736 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ATG10Q9H0Y0 220 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FBXO6Q9NRD1 293 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ARL15Q9NXU5 204 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KCNN3Q9UGI6 736 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MRPS33Q9Y291 106 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DYRK1BQ9Y463 629 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MYO7BQ6PIF6 2116 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZGRF1Q86YA3 2104 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR2W5A6NFC9 320 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LCMT2O60294 686 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CEP104O60308 925 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GALR3O60755 368 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZFAND5O76080 213 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TUBB4AP04350 444 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CDH1P12830 882 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TFEBP19484 476 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ARNTP27540 789 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 AP1S2P56377 157 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 IL2P60568 153 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HSF1Q00613 529 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 QSOX2Q6ZRP7 698 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PRSS41Q7RTY9 318 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CD163Q86VB7 1156 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SULF2Q8IWU5 870 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LRRC56Q8IYG6 542 aaPredicted RBP11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 C16orf52Q8NHV5 167 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 AIF1LQ9BQI0 150 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DESI2Q9BSY9 194 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RBCK1Q9BYM8 510 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZFP69BQ9UJL9 534 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FBXO5Q9UKT4 447 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 YARS2Q9Y2Z4 477 aaKnown RBP11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ASB1Q9Y576 335 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CAPN6Q9Y6Q1 641 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NUP210LQ5VU65 1888 aa11.49□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CNTRLQ7Z7A1 2325 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FAM221AA4D161 298 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZNF860A6NHJ4 632 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SAGE2PA6NJ88 616 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FIGNL2A6NMB9 653 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 A8MUA0 341 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 A8MVJ9 347 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 BCKDKO14874 412 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HS6ST1O60243 411 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KRT38O76015 456 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PDE9AO76083 593 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KRT14P02533 472 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NPPBP16860 134 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 AHRP35869 848 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KCNJ1P48048 391 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SSR4P51571 173 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 STXBP1P61764 594 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FOLH1Q04609 750 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 BMPR2Q13873 1038 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RBBP5Q15291 538 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TESK1Q15569 626 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 STRA8Q7Z7C7 330 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SLC22A16Q86VW1 577 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 B3GNT7Q8NFL0 401 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 EEF1AKMT1Q8WVE0 214 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TSLPQ969D9 159 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 VMP1Q96GC9 406 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NAP1L3Q99457 506 aaPredicted RBP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 AARSD1Q9BTE6 412 aaKnown RBP11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SARGQ9BW04 601 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RHBGQ9H310 441 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LANCL2Q9NS86 450 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HPF1Q9NWY4 346 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PDE10AQ9Y233 779 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RNF6Q9Y252 685 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MMACHCQ9Y4U1 282 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KCNE2Q9Y6J6 123 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ABCA12Q86UK0 2595 aa11.48□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DOCK10Q96BY6 2186 aa11.47□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms