RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 APOPT1Q96IL0 206 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 SEC16BQ96JE7 1060 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 FAR2Q96K12 515 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CATSPER2Q96P56 530 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 CDK15Q96Q40 435 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 SLC6A16Q9GZN6 736 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 KLHL31Q9H511 634 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 HCN3Q9P1Z3 774 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 COPG2Q9UBF2 871 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 MID2Q9UJV3 735 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 NXT1Q9UKK6 140 aaKnown RBP14.95□□□□□ -0.02
BRAT1-202ENST00000421712 RNF11Q9Y3C5 154 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 MAP4K5Q9Y4K4 846 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 PCDHGA11Q9Y5H2 935 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 USP24Q9UPU5 2620 aa14.95□□□□□ -0.02
BRAT1-202ENST00000421712 LRIT2A6NDA9 550 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ZNF860A6NHJ4 632 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 OR7A17O14581 309 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 SH3BGRLO75368 114 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 KLF7O75840 302 aaPredicted RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 B3GALT4O96024 378 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 OTCP00480 354 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 RPS17P08708 135 aaKnown RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 FURINP09958 794 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ZGLP1P0C6A0 271 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 MYZAPP0CAP1 466 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 SNRPNP63162 240 aaKnown RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 BTN3A2P78410 334 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 CLCQ05315 142 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 PCDH1Q08174 1060 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 TGM3Q08188 693 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 SSPNQ14714 243 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 UGT8Q16880 541 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 UNC50Q53HI1 259 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 VWA2Q5GFL6 755 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 CFAP157Q5JU67 520 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ZNF678Q5SXM1 525 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 MFSD4BQ5TF39 518 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ADNP2Q6IQ32 1131 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 NIPAL1Q6NVV3 410 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 LRIG3Q6UXM1 1119 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 RAB43Q86YS6 212 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 BANPQ8N9N5 519 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ARMC2Q8NEN0 867 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 OR7G3Q8NG95 312 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 OR52B6Q8NGF0 335 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 OR2Y1Q8NGV0 311 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 OR51Q1Q8NH59 317 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 STT3BQ8TCJ2 826 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ZNF483Q8TF39 744 aaPredicted RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 MTFMTQ96DP5 389 aaKnown RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 TMEM237Q96Q45 408 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 ARHGAP9Q9BRR9 750 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 REXO4Q9GZR2 422 aaKnown RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 RHBGQ9H310 441 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 MKKSQ9NPJ1 570 aaPredicted RBP14.94□□□□□ -0.02
BRAT1-202ENST00000421712 SENP1Q9P0U3 644 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 POLHQ9Y253 713 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 PLLPQ9Y342 182 aa14.94□□□□□ -0.02
BRAT1-202ENST00000421712 CFAP47Q6ZTR5 3102 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 A0A0G2JN53 185 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 GOLGA6L10A6NI86 522 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 G3V2L1 256 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 ERI3O43414 337 aaKnown RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 GALR3O60755 368 aaPredicted RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 CNOT3O75175 753 aaKnown RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 RDH16O75452 317 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 RECKO95980 971 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 TGFB1P01137 390 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 SERPINB1P30740 379 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 PLA2G16P53816 162 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 RHDQ02161 417 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 HYAL2Q12891 473 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 ZRSR2Q15696 482 aaKnown RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 CRTC2Q53ET0 693 aaPredicted RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 TRIM40Q6P9F5 258 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 CHSY3Q70JA7 882 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 VN1R5Q7Z5H4 357 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 LAS2Q8IYD9 372 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 AMER3Q8N944 861 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 L3MBTL4Q8NA19 623 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 OR4F6Q8NGB9 312 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 HUS1BQ8NHY5 278 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 RDH11Q8TC12 318 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 THAP4Q8WY91 577 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 EXTL1Q92935 676 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 GAL3ST3Q96A11 431 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 F2RL3Q96RI0 385 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 MTERF1Q99551 399 aaKnown RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 CRB3Q9BUF7 120 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 NTMT1Q9BV86 223 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 C1QTNF3Q9BXJ4 246 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 SLC26A1Q9H2B4 701 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 WDR54Q9H977 334 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 ZBTB26Q9HCK0 441 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 ARGLU1Q9NWB6 273 aaPredicted RBP14.93□□□□□ -0.02
BRAT1-202ENST00000421712 MKS1Q9NXB0 559 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 ADGRE2Q9UHX3 823 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 MAN2B2Q9Y2E5 1009 aa14.93□□□□□ -0.02
BRAT1-202ENST00000421712 LAMA5O15230 3695 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms