RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 TRIP10Q15642 601 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TSC22D1Q15714 1073 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 NPTX1Q15818 432 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SYT16Q17RD7 645 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ASTE1Q2TB18 679 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CAVIN4Q5BKX8 364 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC10A5Q5PT55 438 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 OGFRL1Q5TC84 451 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 IRAK1BP1Q5VVH5 260 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRNP1Q6NT89 227 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TTI2Q6NXR4 508 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ANKRD54Q6NXT1 300 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZFP1Q6P2D0 407 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TTC27Q6P3X3 843 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PQLC2Q6ZP29 291 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 G2E3Q7L622 706 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 AKAP14Q86UN6 197 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GPR180Q86V85 440 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDR2LQ86X02 465 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SNX32Q86XE0 403 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ELMOD2Q8IZ81 293 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 NAGSQ8N159 534 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 RFLNBQ8N5W9 214 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ARL6IP6Q8N6S5 226 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 RBM15BQ8NDT2 890 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CSNK2A3Q8NEV1 391 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TSPAN14Q8NG11 270 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 NCOA7Q8NI08 942 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 BRSK1Q8TDC3 778 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PPP4R1Q8TF05 950 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CAPSLQ8WWF8 208 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSPC1Q8WXF1 523 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 S100ZQ8WXG8 99 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 P2RX5Q93086 422 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 INTS12Q96CB8 462 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 DCUN1D1Q96GG9 259 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZNF486Q96H40 463 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CNDP2Q96KP4 475 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 EGLN2Q96KS0 407 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CEP170P1Q96L14 293 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CNOT6LQ96LI5 555 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 MTMR9Q96QG7 549 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 VPS35Q96QK1 796 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CDRT15Q96T59 188 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CSF3RQ99062 836 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 CYTH2Q99418 400 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PIP5K1AQ99755 562 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TUBA1CQ9BQE3 449 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PCGF1Q9BSM1 259 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 STRA6Q9BX79 667 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 AP1M1Q9BXS5 423 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GON7Q9BXV9 100 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRIM15Q9C019 465 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GLT8D2Q9H1C3 349 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 TRPV6Q9H1D0 765 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 C1orf21Q9H246 121 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 BOLA2Q9H3K6 86 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLA2Q9H6Q3 261 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 UBTD1Q9HAC8 227 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 FANCEQ9HB96 536 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 NEK6Q9HC98 313 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 HMG20AQ9NP66 347 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 FARSBQ9NSD9 589 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 AGPAT5Q9NUQ2 364 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GIMAP4Q9NUV9 329 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PARVAQ9NVD7 372 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PTBP2Q9UKA9 531 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 INTS6Q9UL03 887 aaKnown RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 GRID1Q9ULK0 1009 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 PACSIN2Q9UNF0 486 aaPredicted RBP3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 LOXL2Q9Y4K0 774 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 MAU2Q9Y6X3 613 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 MROH2AA6NES4 1674 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLIT3O75094 1523 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 NID2Q14112 1375 aa3.23□□□□□ -1.89
SDCBPP3-201ENST00000419629 MROH1Q8NDA8 1641 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PHRF1Q9P1Y6 1649 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PFASO15067 1338 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 FLT1P17948 1338 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 EDC4Q6P2E9 1401 aaKnown RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ISPDA4D126 451 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 LRRIQ4A6NIV6 560 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 GOLGA8JA6NMD2 632 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 C2orf81A6NN90 581 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 CLDN25C9JDP6 229 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 H7C0C1 242 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 J3KRW8 73 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SNAP23O00161 211 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PSMD12O00232 456 aaPredicted RBP3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 ZW10O43264 779 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SPINT2O43291 252 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 EXTL3O43909 919 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 NMT2O60551 498 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 UGT1A9O60656 530 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 SLC25A12O75746 678 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PLEKHA8P1O95397 391 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 H6PDO95479 791 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 PAHP00439 452 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 MMP1P03956 469 aa3.22□□□□□ -1.89
SDCBPP3-201ENST00000419629 HMGN1P05114 100 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms