RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 OR51B5Q9H339 312 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 GORASP2Q9H8Y8 452 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 FGF22Q9HCT0 170 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 PRDM8Q9NQV8 689 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 GULP1Q9UBP9 304 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 PLAGL1Q9UM63 463 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 PCDHA9Q9Y5H5 950 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 CFAP20Q9Y6A4 193 aaKnown RBP8.05□□□□□ -1.12
USP54-203ENST00000418501 RHPN2P1A8MT19 583 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 GPR37L1O60883 481 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 SERPINB7O75635 380 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 CHRM5P08912 532 aaPredicted RBP8.05□□□□□ -1.12
USP54-203ENST00000418501 CRATP43155 626 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 PPP2CBP62714 309 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 PPP2CAP67775 309 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 PLIN5Q00G26 463 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 RELAQ04206 551 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 LMNTD1Q8N9Z9 388 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 FAM46DQ8NEK8 389 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 FBXO27Q8NI29 283 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 GFM2Q969S9 779 aaKnown RBP8.05□□□□□ -1.12
USP54-203ENST00000418501 TSACCQ96A04 125 aaPredicted RBP8.05□□□□□ -1.12
USP54-203ENST00000418501 GAL3ST3Q96A11 431 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 DPH7Q9BTV6 452 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 MS4A8Q9BY19 250 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 CLK4Q9HAZ1 481 aaKnown RBP8.05□□□□□ -1.12
USP54-203ENST00000418501 TAS2R9Q9NYW1 312 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 NDUFA13Q9P0J0 144 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 CIDEBQ9UHD4 219 aa8.05□□□□□ -1.12
USP54-203ENST00000418501 TCRBV3S1A0A5B6 114 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CASQ2O14958 399 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 SLITRK5O94991 958 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ALBP02768 609 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CSNK2A2P19784 350 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 MPIP34949 423 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 STARD6P59095 220 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 TAS2R50P59544 299 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CYP4F2P78329 520 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 MTAPQ13126 283 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 VEZF1Q14119 521 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 TOR1AIP1Q5JTV8 583 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 SPPL2CQ8IUH8 684 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 SFTPA1Q8IWL2 248 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CLEC4FQ8N1N0 589 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 TTC29Q8NA56 475 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 OR6C4Q8NGE1 309 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 OR56A1Q8NGH5 318 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 OR52E4Q8NGH9 312 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 OR10A6Q8NH74 314 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 GTF2H4Q92759 462 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 FKBP10Q96AY3 582 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 SLC47A1Q96FL8 570 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 TTYH1Q9H313 450 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 FANCEQ9HB96 536 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 IFT80Q9P2H3 777 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 BLOC1S6Q9UL45 172 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 DLGAP4Q9Y2H0 992 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 MYO7AQ13402 2215 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 A0A0J9YY10 115 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 NME4O00746 187 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 SUV39H1O43463 412 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 DFNA5O60443 496 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 RPSAP08865 295 aaKnown RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 CHRNB1P11230 501 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 GGT1P19440 569 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 DDCP20711 480 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CDH3P22223 829 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 CLDN2P57739 230 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 HIPK1Q86Z02 1210 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 C2orf73Q8N5S3 287 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 LILRA3Q8N6C8 439 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 EFCAB3Q8N7B9 438 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 OR2L5Q8NG80 312 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 NR4A3Q92570 626 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 VPS50Q96JG6 964 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 TPT1P8Q9HAU6 139 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 PRDM9Q9NQV7 894 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ACSS1Q9NUB1 689 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 CMTM6Q9NX76 183 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 KIF17Q9P2E2 1029 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 MAP10Q9P2G4 905 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 DNAJB9Q9UBS3 223 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 SLC23A2Q9UGH3 650 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 PRORSD1PA6NEY8 169 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 METTL12A8MUP2 240 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 UQCRBP14927 111 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ZNF23P17027 643 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ENGP17813 658 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 RPS9P46781 194 aaKnown RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 KHKP50053 298 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ATXN3P54252 364 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 FAM92BQ6ZTR7 304 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 SIX5Q8N196 739 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 ZDHHC1Q8WTX9 485 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 OTUB1Q96FW1 271 aaPredicted RBP8.04□□□□□ -1.12
USP54-203ENST00000418501 ZDHHC12Q96GR4 267 aa8.04□□□□□ -1.12
USP54-203ENST00000418501 RDH12Q96NR8 316 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms