RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 STK38LQ9Y2H1 464 aa2.53□□□□□ -2
VPS41-206ENST00000418457 SNX24Q9Y343 169 aa2.53□□□□□ -2
VPS41-206ENST00000418457 ZNF711Q9Y462 761 aa2.53□□□□□ -2
VPS41-206ENST00000418457 PCDHGA5Q9Y5G8 931 aa2.53□□□□□ -2
VPS41-206ENST00000418457 SNX8Q9Y5X2 465 aa2.53□□□□□ -2
VPS41-206ENST00000418457 ALG6Q9Y672 507 aa2.53□□□□□ -2
VPS41-206ENST00000418457 GMEB1Q9Y692 573 aa2.53□□□□□ -2
VPS41-206ENST00000418457 COMMD3-BMI1R4GMX3 469 aa2.53□□□□□ -2
VPS41-206ENST00000418457 SCN4AP35499 1836 aa2.53□□□□□ -2
VPS41-206ENST00000418457 SBF2Q86WG5 1849 aa2.53□□□□□ -2
VPS41-206ENST00000418457 RGPD3A6NKT7 1758 aaPredicted RBP2.53□□□□□ -2
VPS41-206ENST00000418457 RGPD4Q7Z3J3 1758 aa2.53□□□□□ -2
VPS41-206ENST00000418457 MYH11P35749 1972 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GREB1LQ9C091 1923 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 SNED1Q8TER0 1413 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ASTN1O14525 1302 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 NFASCO94856 1347 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 QSER1Q2KHR3 1735 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 NRAPQ86VF7 1730 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SMIM31A0A1B0GVY4 71 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GSTTP1A0A1W2PQM5 241 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SMIM23A6NLE4 172 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 C15orf62A8K5M9 175 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 E9PMD0 336 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PLK4O00444 970 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ZBTB5O15062 677 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TM9SF1O15321 606 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PAPSS1O43252 624 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 SPOPO43791 374 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SLC37A4O43826 429 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 EDF1O60869 148 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 FKBP6O75344 327 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 CSDE1O75534 798 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 CIB2O75838 187 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 AKAP3O75969 853 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 BEST1O76090 585 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TGDSO95455 350 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TDP2O95551 362 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 CETPP11597 493 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SELLP14151 372 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TAC1P20366 129 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SP100P23497 879 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 PHBP35232 272 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 AHRP35869 848 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GYG1P46976 350 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SUOXP51687 545 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PNLIPRP2P54317 469 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SLC12A3P55017 1021 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 MFAP3P55082 362 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 MLLT10P55197 1068 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 IRX4P78413 519 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 MYL7Q01449 175 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 CDR2Q01850 454 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SLC34A1Q06495 639 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ENPEPQ07075 957 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 AP1B1Q10567 949 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 BFSP1Q12934 665 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ITGA9Q13797 1035 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GIT2Q14161 759 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PCLAFQ15004 111 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 DLG2Q15700 870 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 NTRK2Q16620 822 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 C15orf59Q2T9L4 293 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 TRMT5Q32P41 509 aaKnown RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 KLHL22Q53GT1 634 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 RAB6CQ53S08 254 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 SLC10A5Q5PT55 438 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PDSS1Q5T2R2 415 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 TTC27Q6P3X3 843 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GDPD4Q6W3E5 623 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 C9orf139Q6ZV77 190 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 KCTD8Q6ZWB6 473 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 CENPUQ71F23 418 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 Q75L30 129 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ENOSF1Q7L5Y1 443 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GALNT5Q7Z7M9 940 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 DSG4Q86SJ6 1040 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 KBTBD6Q86V97 674 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 LCA5Q86VQ0 697 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 LONP2Q86WA8 852 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 NR2C2APQ86WQ0 139 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ZNF677Q86XU0 584 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ECHDC2Q86YB7 292 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 C12orf56Q8IXR9 622 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ST13P4Q8IZP2 240 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 KIF2BQ8N4N8 673 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GBGT1Q8N5D6 347 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 OR13A1Q8NGR1 328 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 OR52I2Q8NH67 350 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 FAM81AQ8TBF8 368 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 C10orf82Q8WW14 230 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 IRGQQ8WZA9 623 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PRCCQ92733 491 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 MCUR1Q96AQ8 359 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ERP27Q96DN0 273 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 GBP5Q96PP8 586 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 IWS1Q96ST2 819 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 PAFAH2Q99487 392 aa2.52□□□□□ -2.01
VPS41-206ENST00000418457 ZNF184Q99676 751 aaPredicted RBP2.52□□□□□ -2.01
VPS41-206ENST00000418457 AGPAT1Q99943 283 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms