RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CTSAP10619 480 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 DEFB103AP81534 67 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 SPIBQ01892 262 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 SFSWAPQ12872 951 aaKnown RBP13.92□□□□□ -0.18
HDAC9-208ENST00000417496 EXOC3L2Q2M3D2 409 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 PLEKHG7Q6ZR37 379 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 METTL3Q86U44 580 aaKnown RBP13.92□□□□□ -0.18
HDAC9-208ENST00000417496 OR10G2Q8NGC3 310 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 RHOXF1Q8NHV9 184 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 GTPBP3Q969Y2 492 aaKnown RBP13.92□□□□□ -0.18
HDAC9-208ENST00000417496 DACH2Q96NX9 599 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 PSORS1C1Q9UIG5 152 aa13.92□□□□□ -0.18
HDAC9-208ENST00000417496 PCDH17O14917 1159 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 GRM6O15303 877 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF8P17098 575 aaPredicted RBP13.91□□□□□ -0.18
HDAC9-208ENST00000417496 POLR2LP62875 67 aaKnown RBP13.91□□□□□ -0.18
HDAC9-208ENST00000417496 GRIN2CQ14957 1233 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 PRSS53Q2L4Q9 553 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 MPEG1Q2M385 716 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 UBE2UQ5VVX9 321 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 ARMCX6Q7L4S7 300 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 SYTL1Q8IYJ3 562 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 C2orf73Q8N5S3 287 aaPredicted RBP13.91□□□□□ -0.18
HDAC9-208ENST00000417496 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 IPCEF1Q8WWN9 437 aaPredicted RBP13.91□□□□□ -0.18
HDAC9-208ENST00000417496 TCEAL4Q96EI5 215 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 BCL7BQ9BQE9 202 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 SLC35A5Q9BS91 424 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 GABARAPL3Q9BY60 117 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 ROGDIQ9GZN7 287 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 OR51E2Q9H255 320 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 PADI2Q9Y2J8 665 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 TRIM43BA6NCK2 446 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 KPNA5O15131 536 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 CCL16O15467 120 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 TBX1O43435 398 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 TLL1O43897 1013 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 UGDHO60701 494 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 CXCL10P02778 98 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 DNTTP04053 509 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 CTSLP07711 333 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 ADRA2AP08913 450 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 PABPC1P11940 636 aaKnown RBP13.91□□□□□ -0.18
HDAC9-208ENST00000417496 GGT2P36268 569 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 TP53BP2Q13625 1128 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 ADIPOR2Q86V24 386 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 DNAJC22Q8N4W6 341 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 WDR48Q8TAF3 677 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 VWCEQ96DN2 955 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 QPCTLQ9NXS2 382 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 SCHIP1Q9P0W5 487 aaPredicted RBP13.91□□□□□ -0.18
HDAC9-208ENST00000417496 GULP1Q9UBP9 304 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 BTNL2Q9UIR0 455 aa13.91□□□□□ -0.18
HDAC9-208ENST00000417496 CLDN24A6NM45 220 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 CLCA1A8K7I4 914 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 E9PQ18 207 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 AQP9O43315 295 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 PTHP01270 115 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 LRG1P02750 347 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 CD40LGP29965 261 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 PCGF2P35227 344 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 HNF4AP41235 474 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 RECQLP46063 649 aaPredicted RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 RPS3AP61247 264 aaKnown RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 SLC5A12Q1EHB4 618 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 HENMT1Q5T8I9 393 aaKnown RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 TMEM220Q6QAJ8 160 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 COMMD6Q7Z4G1 85 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 RNF130Q86XS8 419 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 RASGRP3Q8IV61 690 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 LGI4Q8N135 537 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 CPA6Q8N4T0 437 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 PSD4Q8NDX1 1056 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF740Q8NDX6 193 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF480Q8WV37 535 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 COQ8BQ96D53 544 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 NRTNQ99748 197 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 HEPHQ9BQS7 1158 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 SORBS1Q9BX66 1292 aaKnown RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 EMILIN2Q9BXX0 1053 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ITM2CQ9NQX7 267 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF229Q9UJW7 825 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 CAB39Q9Y376 341 aaPredicted RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 FAM227AF5H4B4 570 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 TIMP2P16035 220 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 GTF2E2P29084 291 aaKnown RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 TIA1P31483 386 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 VIPR1P32241 457 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 GRK3P35626 688 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 PRIM2P49643 509 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 HNRNPFP52597 415 aaKnown RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 METAP1P53582 386 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ELP6Q0PNE2 266 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 TMEM115Q12893 351 aaPredicted RBP13.9□□□□□ -0.18
HDAC9-208ENST00000417496 STARD3Q14849 445 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZNF404Q494X3 552 aa13.9□□□□□ -0.18
HDAC9-208ENST00000417496 ZDHHC20Q5W0Z9 365 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms