RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 FRA10AC1Q70Z53 315 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 ADAMTSL2Q86TH1 951 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 THOC6Q86W42 341 aaKnown RBP23.86■■□□□ 1.41
VEGFA-208ENST00000417285 NR4A3Q92570 626 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 TBC1D20Q96BZ9 403 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 MOCOSQ96EN8 888 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 PEX11GQ96HA9 241 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 LPAR4Q99677 370 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 EGFL8Q99944 293 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 AIF1LQ9BQI0 150 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 MCMBPQ9BTE3 642 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 KCNK13Q9HB14 408 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 MMP25Q9NPA2 562 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 SMYD2Q9NRG4 433 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 LANCL2Q9NS86 450 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 GRHL1Q9NZI5 618 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 OARD1Q9Y530 152 aa23.86■■□□□ 1.41
VEGFA-208ENST00000417285 OR2W5A6NFC9 320 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 PRAMEF2O60811 474 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 RASAL1O95294 804 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 CLDN1O95832 211 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 FHP07954 510 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 JAK1P23458 1154 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 POU4F1Q01851 419 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 CAV1Q03135 178 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 ABRAXAS2Q15018 415 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 DEFB134Q4QY38 66 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 SFT2D3Q587I9 215 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 NXPE4Q6UWF7 544 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 CEP97Q8IW35 865 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 C17orf53Q8N3J3 647 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-208ENST00000417285 TSPAN17Q96FV3 270 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 RAB17Q9H0T7 212 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 ABI3Q9P2A4 366 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 CTNNAL1Q9UBT7 734 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 PCDHGB6Q9Y5F9 930 aa23.85■■□□□ 1.41
VEGFA-208ENST00000417285 CDK2AP1O14519 115 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 CHST10O43529 356 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 F10P00742 488 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 CYS1Q717R9 158 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 SHISA5Q8N114 240 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 ANKRD49Q8WVL7 239 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 TSNARE1Q96NA8 513 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 CPNE1Q99829 537 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 PHACTR1Q9C0D0 580 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 SLC22A14Q9Y267 594 aa23.84■■□□□ 1.41
VEGFA-208ENST00000417285 ZNF860A6NHJ4 632 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 H2AFYO75367 372 aaKnown RBP23.83■■□□□ 1.41
VEGFA-208ENST00000417285 PIAS1O75925 651 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 GSTA2P09210 222 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 REEP5Q00765 189 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 TSNQ15631 228 aaKnown RBP23.83■■□□□ 1.41
VEGFA-208ENST00000417285 MEP1AQ16819 746 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 PAPD4Q6PIY7 484 aaKnown RBP23.83■■□□□ 1.41
VEGFA-208ENST00000417285 C3orf62Q6ZUJ4 267 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 OR5T3Q8NGG3 340 aa23.83■■□□□ 1.41
VEGFA-208ENST00000417285 MTO1Q9Y2Z2 717 aaKnown RBP23.83■■□□□ 1.41
VEGFA-208ENST00000417285 DIDO1Q9BTC0 2240 aaKnown RBP23.82■■□□□ 1.4
VEGFA-208ENST00000417285 TCRBV9S1A1TA0A576 114 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 CXorf49A8MYA2 514 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-208ENST00000417285 CDC123O75794 336 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-208ENST00000417285 SERPINA6P08185 405 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 ZNF888P0CJ79 500 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-208ENST00000417285 TDGF1P3P51864 188 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 PLTPP55058 493 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 OR4D2P58180 307 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 TAS2R50P59544 299 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 USP10Q14694 798 aaKnown RBP23.82■■□□□ 1.4
VEGFA-208ENST00000417285 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.82■■□□□ 1.41e-17■■■□□ 17
VEGFA-208ENST00000417285 TMPRSS11BQ86T26 416 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 SLC5A8Q8N695 610 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 UTP15Q8TED0 518 aaKnown RBP23.82■■□□□ 1.4
VEGFA-208ENST00000417285 RELTQ969Z4 430 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 RBBP8Q99708 897 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 CAPS2Q9BXY5 557 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 SLC6A16Q9GZN6 736 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 DERL2Q9GZP9 239 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 SPNS1Q9H2V7 528 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 SCN3AQ9NY46 2000 aa23.82■■□□□ 1.4
VEGFA-208ENST00000417285 ZGRF1Q86YA3 2104 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 FAM159BA6NKW6 160 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 PRMT3O60678 531 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 GNAZP19086 355 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 GP5P40197 560 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 RBBP5Q15291 538 aaKnown RBP23.81■■□□□ 1.4
VEGFA-208ENST00000417285 ZNF766Q5HY98 468 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 GFRALQ6UXV0 394 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 ZNF572Q7Z3I7 529 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-208ENST00000417285 AMER2Q8N7J2 671 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 ANKRD53Q8N9V6 530 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 GPR22Q99680 433 aa23.81■■□□□ 1.4
VEGFA-208ENST00000417285 UTP23Q9BRU9 249 aaKnown RBP23.81■■□□□ 1.4
VEGFA-208ENST00000417285 B4GALT2O60909 372 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 WISP3O95389 354 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-208ENST00000417285 SMIM10L1P0DMW3 83 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 STMN1P16949 149 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 CCDC25Q86WR0 208 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 CTAGE3PQ8IX95 158 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 KLHDC8AQ8IYD2 350 aa23.8■■□□□ 1.4
VEGFA-208ENST00000417285 LGI4Q8N135 537 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms