RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ALOX12P18054 663 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 AGAP20933 346 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 PGGT1BP53609 377 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 TAS2R50P59544 299 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 IL2P60568 153 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 OLR1P78380 273 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 CDSNQ15517 529 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 CATSPEREQ5SY80 951 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 ZNF468Q5VIY5 522 aaPredicted RBP13.91□□□□□ -0.18
RPS28-201ENST00000417088 SLC25A25Q6KCM7 469 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 KIAA0408Q6ZU52 694 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 GDF7Q7Z4P5 450 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.91□□□□□ -0.18
RPS28-201ENST00000417088 SIAH3Q8IW03 269 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 CNTN4Q8IWV2 1026 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 KIF2BQ8N4N8 673 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 HORMAD2Q8N7B1 307 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 NAP1L3Q99457 506 aaPredicted RBP13.91□□□□□ -0.18
RPS28-201ENST00000417088 LRFN1Q9P244 771 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 SLC17A6Q9P2U8 582 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 POLQO75417 2590 aa13.91□□□□□ -0.18
RPS28-201ENST00000417088 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
RPS28-201ENST00000417088 ASNA1O43681 348 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 B4GALT2O60909 372 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 TTC4O95801 387 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 SERPIND1P05546 499 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 JAK1P23458 1154 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 FNTAP49354 379 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 SMSP52788 366 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 AP1S2P56377 157 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 MSS51Q4VC12 460 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 SPANXN3Q5MJ09 141 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 STRA8Q7Z7C7 330 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 RPS19BP1Q86WX3 136 aaKnown RBP13.9□□□□□ -0.18
RPS28-201ENST00000417088 IGDCC3Q8IVU1 814 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 GABPB2Q8TAK5 448 aaPredicted RBP13.9□□□□□ -0.18
RPS28-201ENST00000417088 NT5CQ8TCD5 201 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 NEIL2Q969S2 332 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 FBXL8Q96CD0 374 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 TRIM51Q9BSJ1 452 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 TRIM54Q9BYV2 358 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 TRIM8Q9BZR9 551 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 PLAC1Q9HBJ0 212 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 ZFP69BQ9UJL9 534 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 MEMO1Q9Y316 297 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 CCDC168Q8NDH2 2452 aa13.9□□□□□ -0.18
RPS28-201ENST00000417088 CTAGE15A4D2H0 777 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 C19orf84I3L1E1 186 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 CDK2AP1O14519 115 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 DNALI1O14645 258 aaPredicted RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 ZNHIT1O43257 154 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 ZNF888P0CJ79 500 aaPredicted RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 TPP2P29144 1249 aaPredicted RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 SCTRP47872 440 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 BTG2P78543 158 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 GTF3C1Q12789 2109 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 CSHL1Q14406 222 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 MAPKAPK3Q16644 382 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 TEDDM1Q5T9Z0 273 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 NIPAL1Q6NVV3 410 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 NCCRP1Q6ZVX7 275 aaPredicted RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 GALNT7Q86SF2 657 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 ZNF227Q86WZ6 799 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 CHERPQ8IWX8 916 aaKnown RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 ZNF295-AS1Q8N0V1 137 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 CYP4X1Q8N118 509 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 TBC1D19Q8N5T2 526 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 FAM98AQ8NCA5 519 aaKnown RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 ACTRT1Q8TDG2 376 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 UTP15Q8TED0 518 aaKnown RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 SLC5A11Q8WWX8 675 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 ATL1Q8WXF7 558 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 CERS2Q96G23 380 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 LURAP1Q96LR2 239 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 PTCHD1Q96NR3 888 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 TRIM45Q9H8W5 580 aaPredicted RBP13.89□□□□□ -0.19
RPS28-201ENST00000417088 IKZF3Q9UKT9 509 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 F8P00451 2351 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 DCHS2Q6V1P9 2916 aa13.89□□□□□ -0.19
RPS28-201ENST00000417088 CACNA1CQ13936 2221 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 IGKV3D-11A0A0A0MRZ8 115 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
RPS28-201ENST00000417088 NME2P1O60361 137 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 PRMT3O60678 531 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 SLC25A12O75746 678 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 CLDN14O95500 239 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 GUCA1CO95843 209 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 NME2P22392 152 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 AHRP35869 848 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 HNF4AP41235 474 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 KIR3DL1P43629 444 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 MLF1P58340 268 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 RAB8AP61006 207 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 SKP1P63208 163 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 HSF1Q00613 529 aa13.88□□□□□ -0.19
RPS28-201ENST00000417088 RGS1Q08116 209 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms