RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 ESPNB1AK53 854 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 SLC16A5O15375 505 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ZNF500O60304 480 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 GALR3O60755 368 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 UNC5CO95185 931 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 C8GP07360 202 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ICAM2P13598 275 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 SAT1P21673 171 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 GPX6P59796 221 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 OLR1P78380 273 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ZNF33BQ06732 778 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 FRG1Q14331 258 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 NDUFA9Q16795 377 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 PPP1R3AQ16821 1122 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ACER2Q5QJU3 275 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 SBSNQ6UWP8 590 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 GPATCH11Q8N954 259 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ANKRD53Q8N9V6 530 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 DNAJB8Q8NHS0 232 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 MCOLN3Q8TDD5 553 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ADAMTS18Q8TE60 1221 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 LINGO1Q96FE5 620 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 PEX11GQ96HA9 241 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 CCDC120Q96HB5 630 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 MAGEB10Q96LZ2 347 aaPredicted RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 KLHL31Q9H511 634 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 SMYD2Q9NRG4 433 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 UTP6Q9NYH9 597 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 MTRF1LQ9UGC7 380 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 TRMT6Q9UJA5 497 aaKnown RBP11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ENTPD4Q9Y227 616 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 ZNF835Q9Y2P0 537 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 CLDN16Q9Y5I7 305 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 PCNX1Q96RV3 2341 aa11.69□□□□□ -0.54
NCKIPSD-203ENST00000415281 CELSR1Q9NYQ6 3014 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 GTF3C1Q12789 2109 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 TCRBV9S1A1TA0A576 114 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 CXorf49A8MYA2 514 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 NEURL1O76050 574 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 RASAL1O95294 804 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 TBX6O95947 436 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 CYC1P08574 325 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 CA7P43166 264 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 BTG2P78543 158 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 ADORA2A-AS1P86434 159 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 BTBD16Q32M84 506 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 MINDY4Q4G0A6 757 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 SFT2D3Q587I9 215 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 HECTD2Q5U5R9 776 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 SPINK14Q6IE38 97 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 GFRALQ6UXV0 394 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 FGD2Q7Z6J4 655 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 GALNT7Q86SF2 657 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 C17orf64Q86WR6 236 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 SIAH3Q8IW03 269 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 CTAGE3PQ8IX95 158 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 IFT20Q8IY31 132 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 SRRM1Q8IYB3 904 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 SLC34A3Q8N130 599 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 KIF2BQ8N4N8 673 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 CAMKVQ8NCB2 501 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 M1APQ8TC57 530 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 ELP5Q8TE02 316 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 UTP15Q8TED0 518 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 FBF1Q8TES7 1133 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 NEIL2Q969S2 332 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 ALKBH8Q96BT7 664 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 PDLIM5Q96HC4 596 aaKnown RBP11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 FMO2Q99518 471 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 MCMBPQ9BTE3 642 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 RBCK1Q9BYM8 510 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 PHACTR1Q9C0D0 580 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 PCBD2Q9H0N5 130 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 L2HGDHQ9H9P8 463 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 MMP25Q9NPA2 562 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 ANKRD10Q9NXR5 420 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 TAS2R13Q9NYV9 303 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 VWA7Q9Y334 891 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 PCDHGB6Q9Y5F9 930 aa11.68□□□□□ -0.54
NCKIPSD-203ENST00000415281 ARHGAP10A1A4S6 786 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 ASPDHA6ND91 283 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 MAGEB17A8MXT2 336 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 FAM227AF5H4B4 570 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 CHST10O43529 356 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 PRAMEF4O60810 478 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 CDC123O75794 336 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 GSTA2P09210 222 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 POU3F2P20265 443 aaPredicted RBP11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 SCTRP47872 440 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 SP140Q13342 867 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 USP10Q14694 798 aaKnown RBP11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 ZNF766Q5HY98 468 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 TEX35Q5T0J7 233 aa11.67□□□□□ -0.54
NCKIPSD-203ENST00000415281 ABHD17BQ5VST6 288 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms