RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SHFQ7M4L6 423 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TRAPPC11Q7Z392 1133 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ZDHHC23Q8IYP9 409 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 C1orf87Q8N0U7 546 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 DCLK2Q8N568 766 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 OR52N4Q8NGI2 321 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 OSTF1Q92882 214 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TOP1MTQ969P6 601 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TEFMQ96QE5 360 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 ASCL2Q99929 193 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 DCLK3Q9C098 648 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TMEM117Q9H0C3 514 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ECHDC1Q9NTX5 307 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 DNAJB4Q9UDY4 337 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TINAGQ9UJW2 476 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TCAF1Q9Y4C2 921 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 SPIN1Q9Y657 262 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 TTC3P53804 2025 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 LOC100509620A0A075B734 347 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 DIRC3C9JPN6 131 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 IFIT3O14879 490 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 ATP6V1C1P21283 382 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 MYF6P23409 242 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 DLSTP36957 453 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 POLR2LP62875 67 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 MRPS34P82930 218 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 HOXA4Q00056 320 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 ANGPT1Q15389 498 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ANKRD55Q3KP44 614 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TOR1AIP1Q5JTV8 583 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 PRAMEF7Q5VXH5 474 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 DHRS7BQ6IAN0 325 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 MFSD12Q6NUT3 480 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ODF3L1Q8IXM7 274 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ZNF843Q8N446 348 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TSPAN14Q8NG11 270 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 AZIN2Q96A70 460 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TMEM18Q96B42 140 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 PYCR2Q96C36 320 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 SLC41A3Q96GZ6 507 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 RITA1Q96K30 269 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 MARK4Q96L34 752 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ZNF396Q96N95 335 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 SLC22A12Q96S37 553 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 LZTS2Q9BRK4 669 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 THAP2Q9H0W7 228 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CNGB3Q9NQW8 809 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 SERTAD4Q9NUC0 356 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 HMG20BQ9P0W2 317 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ENTPD4Q9Y227 616 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ANK1P16157 1881 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 NUP210Q8TEM1 1887 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 HYKKA2RU49 373 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 H0YIV9 168 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ATP9AO75110 1047 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 GLCEO94923 617 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 MBD3O95983 291 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CRYGCP07315 174 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 SRCP12931 536 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 HOXB8P17481 243 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 CCNCP24863 283 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ARSEP51690 589 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ROR2Q01974 943 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 FOXI1Q12951 378 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 PPP1R8Q12972 351 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 MAD2L1Q13257 205 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 GPNMBQ14956 572 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 C15orf59Q2T9L4 293 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 C6orf10Q5SRN2 563 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ZDHHC20Q5W0Z9 365 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 RAET1GQ6H3X3 334 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 RNF207Q6ZRF8 634 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 NRARPQ7Z6K4 114 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 KCNMB4Q86W47 210 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TMEM126BQ8IUX1 230 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 SNAPC3Q92966 411 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 C14orf79Q96F83 325 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 CDK5RAP1Q96SZ6 601 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 NFKBIZQ9BYH8 718 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 RAB17Q9H0T7 212 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 YY1AP1Q9H869 796 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ANKZF1Q9H8Y5 726 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 SEC61A2Q9H9S3 476 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 LRRC4Q9HBW1 653 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ZDHHC18Q9NUE0 388 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 ANKMY1Q9P2S6 941 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 FBXL2Q9UKC9 423 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 TTC7AQ9ULT0 858 aaPredicted RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 CLEC4AQ9UMR7 237 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 MRPS2Q9Y399 296 aaKnown RBP2.43□□□□□ -2.02
MCF2-204ENST00000414978 EML5Q05BV3 1969 aa2.43□□□□□ -2.02
MCF2-204ENST00000414978 UMODL1Q5DID0 1318 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 SZT2Q5T011 3432 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 LGALS8O00214 317 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 HIP1O00291 1037 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 TEX28O15482 410 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 NOL3O60936 208 aaKnown RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 PAPSS2O95340 614 aaPredicted RBP2.42□□□□□ -2.02
MCF2-204ENST00000414978 GJB2P29033 226 aa2.42□□□□□ -2.02
MCF2-204ENST00000414978 MNDAP41218 407 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms