RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 FAM8A1Q9UBU6 413 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 TINAGQ9UJW2 476 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 CDYLQ9Y232 598 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 HEBP2Q9Y5Z4 205 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 ATRQ13535 2644 aa12.88□□□□□ -0.35
RAPGEF1-204ENST00000414781 BTN3A1O00481 513 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 SPAG7O75391 227 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 RASAL1O95294 804 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 MATN4O95460 622 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 TSPAN12O95859 305 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 CATP04040 527 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 MTHFD1P11586 935 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 TFEBP19484 476 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 TAC1P20366 129 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 MST1P26927 711 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 NDUFS1P28331 727 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 HPDP32754 393 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 TUBB8Q3ZCM7 444 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 CES4AQ5XG92 561 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 CYHR1Q6ZMK1 362 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 ISCA2Q86U28 154 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 PRIMA1Q86XR5 153 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 CENPLQ8N0S6 344 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 EID3Q8N140 333 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 TCP10LQ8TDR4 215 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 PHF10Q8WUB8 498 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 ASB11Q8WXH4 323 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 CCDC126Q96EE4 140 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 THOC3Q96J01 351 aaKnown RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 ALPK1Q96QP1 1244 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 OR52A5Q9H2C5 316 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 CCM2LQ9NUG4 571 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 KCNN3Q9UGI6 736 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 COLEC10Q9Y6Z7 277 aa12.87□□□□□ -0.35
RAPGEF1-204ENST00000414781 TMEM120BA0PK00 339 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 GSAPA4D1B5 854 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 GFYI3L273 518 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 KERAO60938 352 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 MLYCDO95822 493 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 TPBGLP0DKB5 382 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 IRF9Q00978 393 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 ASPHQ12797 758 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 KRT33BQ14525 404 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 NKAIN1Q4KMZ8 207 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 CDKL4Q5MAI5 379 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 NAPRTQ6XQN6 538 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 Q6ZPB1 254 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 FAM83HQ6ZRV2 1179 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 FRA10AC1Q70Z53 315 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 GPSM1Q86YR5 675 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 PLD6Q8N2A8 252 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 SPATA6LQ8N4H0 392 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 RAB42Q8N4Z0 105 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 PHC3Q8NDX5 983 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 TFGQ92734 400 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 N4BP2L2Q92802 583 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 PPM1MQ96MI6 270 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 GPR78Q96P69 363 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 PITPNM3Q9BZ71 974 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 MVB12BQ9H7P6 319 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 PARVBQ9HBI1 364 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 TXLNGQ9NUQ3 528 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 IMP3Q9NV31 184 aaKnown RBP12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 TMEM216Q9P0N5 145 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 POLG2Q9UHN1 485 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 RNF112Q9ULX5 631 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 ASF1AQ9Y294 204 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 ZNF835Q9Y2P0 537 aa12.86□□□□□ -0.35
RAPGEF1-204ENST00000414781 FN1P02751 2386 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 SOCS6O14544 535 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 PLIN3O60664 434 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 SMIM24O75264 130 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 ALOX12BO75342 701 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 PSIP1O75475 530 aaKnown RBP12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 OR2B3O76000 313 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 CPA3P15088 417 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 CREB1P16220 341 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 ACADLP28330 430 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 PDHA2P29803 388 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 RPA3P35244 121 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 HSD17B2P37059 387 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 MEOX1P50221 254 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 PGGT1BP53609 377 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 PRKAA2P54646 552 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 AP1S2P56377 157 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 DLG1Q12959 904 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 HHATQ5VTY9 493 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 UBE2R2Q712K3 238 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 VRK3Q8IV63 474 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 FBXO15Q8NCQ5 510 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms