RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 JAK1P23458 1154 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 GSTM2P28161 218 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 AGTR2P50052 363 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SERPINB8P50452 374 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 RAB8AP61006 207 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SNRPNP63162 240 aaKnown RBP10.59□□□□□ -0.71
RFFL-204ENST00000414419 FOXK1P85037 733 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SLBPQ14493 270 aaKnown RBP eCLIP10.59□□□□□ -0.71
RFFL-204ENST00000414419 FBXO48Q5FWF7 155 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 XKR6Q5GH73 641 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 PAGE2BQ5JRK9 111 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 TOR1AIP1Q5JTV8 583 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SLC6A19Q695T7 634 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 TMEM205Q6UW68 189 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 ISLR2Q6UXK2 745 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SLCO4C1Q6ZQN7 724 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 ISCA2Q86U28 154 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 PDSS2Q86YH6 399 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 AFAP1L2Q8N4X5 818 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 ANKRD53Q8N9V6 530 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 UTP15Q8TED0 518 aaKnown RBP10.59□□□□□ -0.71
RFFL-204ENST00000414419 NXNL1Q96CM4 212 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 PTCD3Q96EY7 689 aaKnown RBP10.59□□□□□ -0.71
RFFL-204ENST00000414419 SEC16BQ96JE7 1060 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 OR1F2PQ96R84 312 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 MESP1Q9BRJ9 268 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 TUBB6Q9BUF5 446 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 CD244Q9BZW8 370 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 VN1R1Q9GZP7 353 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 EHD1Q9H4M9 534 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 SNX15Q9NRS6 342 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 LUZP4Q9P127 313 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 PTBP2Q9UKA9 531 aaKnown RBP10.59□□□□□ -0.71
RFFL-204ENST00000414419 VPS4AQ9UN37 437 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 B3GNT3Q9Y2A9 372 aa10.59□□□□□ -0.71
RFFL-204ENST00000414419 ESPL1Q14674 2120 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 TENM4Q6N022 2769 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 A0A087WUV0 522 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 LOC102723996A0A087X1L8 192 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 A0A088AWK7 358 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 A0A096LPK6 155 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 CCDC189A1A4V9 331 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 POC1B-GALNT4F8VUJ3 575 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 UBXN8O00124 270 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 PSMD12O00232 456 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 CHST10O43529 356 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 CDC123O75794 336 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 KRT38O76015 456 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 ZIC2O95409 532 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 SERPINA7P05543 415 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 PRR35P0CG20 571 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 ZNF10P21506 573 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 GMPRP36959 345 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 MSH2P43246 934 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 GLRBP48167 497 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 SERPINB9P50453 376 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 OLR1P78380 273 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 IRF8Q02556 426 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 ACTN3Q08043 901 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 DLG1Q12959 904 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 LAPTM5Q13571 262 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 ACAP2Q15057 778 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 PLEKHN1Q494U1 663 aaPredicted RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 LINC00696Q6ZRV3 163 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 RIPOR1Q6ZS17 1223 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 LRRC70Q7Z2Q7 622 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 CPEB2Q7Z5Q1 589 aaKnown RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.58□□□□□ -0.72
RFFL-204ENST00000414419 IQCKQ8N0W5 287 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 OR5T3Q8NGG3 340 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 RHEBL1Q8TAI7 183 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 DNAJB14Q8TBM8 379 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 KCTD4Q8WVF5 259 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 TBC1D20Q96BZ9 403 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 CNDP1Q96KN2 507 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 LMF1Q96S06 567 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 EFCAB11Q9BUY7 163 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 RBCK1Q9BYM8 510 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 SLC6A16Q9GZN6 736 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 ZNF700Q9H0M5 742 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 VPS11Q9H270 941 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 NT5DC2Q9H857 520 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 CLK4Q9HAZ1 481 aaKnown RBP10.58□□□□□ -0.72
RFFL-204ENST00000414419 IGSF5Q9NSI5 407 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 PTGFRNQ9P2B2 879 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 OPTCQ9UBM4 332 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 NFU1Q9UMS0 254 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 PLAAQ9Y263 795 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 ANGPTL3Q9Y5C1 460 aa10.58□□□□□ -0.72
RFFL-204ENST00000414419 A0A1W2PQ72 361 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 DYTNA2CJ06 578 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 K7EPI3 171 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 B4GALT2O60909 372 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 SORBS2O94875 1100 aaKnown RBP10.57□□□□□ -0.72
RFFL-204ENST00000414419 KLHL2O95198 593 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 B3GALT4O96024 378 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 FHP07954 510 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 GFAPP14136 432 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 EPB42P16452 691 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms