RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 LOXL2Q9Y4K0 774 aa8.36□□□□□ -1.07
LINC02539-201ENST00000411615 DNAJC15Q9Y5T4 150 aa8.36□□□□□ -1.07
LINC02539-201ENST00000411615 SLC22A7Q9Y694 548 aa8.36□□□□□ -1.07
LINC02539-201ENST00000411615 TRPC5OSA6NMA1 111 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 MAGEB17A8MXT2 336 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TCP11X1B4DZS4 312 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TMEM150CB9EJG8 249 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SLC28A1O00337 649 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 FFAR3O14843 346 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 PLD2O14939 933 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 POLR1CO15160 346 aaPredicted RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 HDAC3O15379 428 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 GPR42O15529 346 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 HCRTR1O43613 425 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 EDF1O60869 148 aaKnown RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 VPS4BO75351 444 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 OR2B3O76000 313 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SEMA3DO95025 777 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TBX6O95947 436 aaPredicted RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 PDYNP01213 254 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SMIM10L1P0DMW3 83 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 PCNAP12004 261 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 PCSK2P16519 638 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 PRPH2P23942 346 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TSFMP43897 325 aaKnown RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 FOXA1P55317 472 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 VSX2P58304 361 aaPredicted RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SKP1P63208 163 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TGM3Q08188 693 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 CYP4F3Q08477 520 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 HYAL2Q12891 473 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TARDBPQ13148 414 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 KCNAB1Q14722 419 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 GPR19Q15760 415 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 NDUFA9Q16795 377 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SMU1Q2TAY7 513 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 WASHC2DQ5SRD0 308 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 DCAF12Q5T6F0 453 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TMEM214Q6NUQ4 689 aaKnown RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 CEACAM20Q6UY09 585 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 PPP1R3BQ86XI6 285 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 WDR75Q8IWA0 830 aaKnown RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 ARHGEF39Q8N4T4 335 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TWIST2Q8WVJ9 160 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SMIM10Q96HG1 83 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 LRFN5Q96NI6 719 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 ZNF317Q96PQ6 595 aaPredicted RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 KCNA7Q96RP8 456 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 MTERF1Q99551 399 aaKnown RBP8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SIKE1Q9BRV8 207 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 CENPKQ9BS16 269 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 NRSN2Q9GZP1 204 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SYNPO2LQ9H987 977 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 POLR1BQ9H9Y6 1135 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SLCO1B3Q9NPD5 702 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 OCIAD1Q9NX40 245 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SIRT5Q9NXA8 310 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SLC39A1Q9NY26 324 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 AHSPQ9NZD4 102 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 VPS29Q9UBQ0 182 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 SRPK3Q9UPE1 567 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 TIMM22Q9Y584 194 aa8.35□□□□□ -1.07
LINC02539-201ENST00000411615 KNTC1P50748 2209 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 A0A088AWK7 358 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 HYKKA2RU49 373 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 FIGNL2A6NMB9 653 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 NVLO15381 856 aaKnown RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 NDUFS4O43181 175 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 RGS14O43566 566 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 RSL1D1O76021 490 aaKnown RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ONECUT2O95948 504 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 JMJD7P0C870 316 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 CCL4P13236 92 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ACPPP15309 386 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ALOX15P16050 662 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ZNF10P21506 573 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 SERPINB3P29508 390 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 LSP1P33241 339 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ID4P47928 161 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 NEK2P51955 445 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 RPS13P62277 151 aaKnown RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 FOXM1Q08050 763 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 RTP5Q14D33 572 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ABRAXAS2Q15018 415 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 HERC3Q15034 1050 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 MUM1Q2TAK8 710 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 XKR7Q5GH72 579 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 TMEM164Q5U3C3 297 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 KHDRBS2Q5VWX1 349 aaKnown RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 CLEC6AQ6EIG7 209 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 RHBDD2Q6NTF9 364 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 PRMT9Q6P2P2 845 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 ABHD13Q7L211 337 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 CCDC116Q8IYX3 515 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 TTC29Q8NA56 475 aaPredicted RBP8.34□□□□□ -1.07
LINC02539-201ENST00000411615 OR2L5Q8NG80 312 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 OR1L3Q8NH93 324 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 PROKR1Q8TCW9 393 aa8.34□□□□□ -1.07
LINC02539-201ENST00000411615 CCT6BQ92526 530 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms