RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SLC17A9Q9BYT1 436 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 SLC6A17Q9H1V8 727 aa19.28■□□□□ 0.68
USP39-204ENST00000409766 PAPOLBQ9NRJ5 636 aaKnown RBP19.28■□□□□ 0.68
USP39-204ENST00000409766 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.68
USP39-204ENST00000409766 BMP10O95393 424 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 CEACAM5P06731 702 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 PSMB5P28074 263 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 PLCL1Q15111 1095 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 CBLL1Q75N03 491 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 LINC01555Q8NAE3 123 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 CIDECQ96AQ7 238 aaPredicted RBP19.27■□□□□ 0.68
USP39-204ENST00000409766 TBC1D20Q96BZ9 403 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 TIMM29Q9BSF4 260 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 SORBS1Q9BX66 1292 aaKnown RBP19.27■□□□□ 0.68
USP39-204ENST00000409766 BTBD1Q9H0C5 482 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 TOR3AQ9H497 397 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 SLC17A4Q9Y2C5 497 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 COMMD3-BMI1R4GMX3 469 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 F5P12259 2224 aa19.27■□□□□ 0.68
USP39-204ENST00000409766 A0A087WXM4 84 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 ANKDD1BA6NHY2 528 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 LATO43561 262 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 NOBOXO60393 691 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 GPR37L1O60883 481 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 ADAM23O75077 832 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 NTRK1P04629 796 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 ETS2P15036 469 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 CXCR2P25025 360 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 TPP2P29144 1249 aaPredicted RBP19.27■□□□□ 0.67
USP39-204ENST00000409766 IGFALSP35858 605 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 CCR8P51685 355 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 MVDP53602 400 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.27■□□□□ 0.67
USP39-204ENST00000409766 IKBIPQ70UQ0 350 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 EIF3MQ7L2H7 374 aaKnown RBP19.27■□□□□ 0.67
USP39-204ENST00000409766 NAGSQ8N159 534 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 GALNT15Q8N3T1 639 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 IL17RCQ8NAC3 791 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 ABHD8Q96I13 439 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 C12orf66Q96MD2 445 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 RIPOR3Q96MK2 946 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 FERD3LQ96RJ6 166 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 OSGEPL1Q9H4B0 414 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 RMI1Q9H9A7 625 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 GPATCH2Q9NW75 528 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 DMTF1Q9Y222 760 aa19.27■□□□□ 0.67
USP39-204ENST00000409766 HEATR5BQ9P2D3 2071 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 A0A1W2PQF6 199 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 PRR19A6NJB7 356 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 PLPP1O14494 284 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 RNGTTO60942 597 aaKnown RBP19.26■□□□□ 0.67
USP39-204ENST00000409766 E2F6O75461 281 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 C6orf47O95873 294 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 DNTTP04053 509 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 ADPRHP54922 357 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 PRSS53Q2L4Q9 553 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 DEPDC1Q5TB30 811 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 KHDRBS2Q5VWX1 349 aaKnown RBP19.26■□□□□ 0.67
USP39-204ENST00000409766 ANKRD34AQ69YU3 496 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 MTSS1LQ765P7 747 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 ADAMTS16Q8TE57 1224 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 MBOAT4Q96T53 435 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 MS4A8Q9BY19 250 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 ZNF717Q9BY31 904 aaPredicted RBP19.26■□□□□ 0.67
USP39-204ENST00000409766 VNN3Q9NY84 501 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 AHSPQ9NZD4 102 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 SPASTQ9UBP0 616 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 ABCG2Q9UNQ0 655 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 KCNK6Q9Y257 313 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 U3KQV3 271 aa19.26■□□□□ 0.67
USP39-204ENST00000409766 PLXND1Q9Y4D7 1925 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 H7BY64 318 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 SEMA3DO95025 777 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 IL3P08700 152 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 PRKACGP22612 351 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 CRYBA2P53672 197 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 REEP5Q00765 189 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 EPS8Q12929 822 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 BIRC2Q13490 618 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 SDE2Q6IQ49 451 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 ZNF852Q6ZMS4 543 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 VTCN1Q7Z7D3 282 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 HIPK1Q86Z02 1210 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 MAL2Q969L2 176 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 PRAP1Q96NZ9 151 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 YTHDF1Q9BYJ9 559 aaKnown RBP19.25■□□□□ 0.67
USP39-204ENST00000409766 FAM118AQ9NWS6 357 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 PCGF2P35227 344 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 CTBSQ01459 385 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 OR2T5Q6IEZ7 315 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 SHQ1Q6PI26 577 aaKnown RBP19.25■□□□□ 0.67
USP39-204ENST00000409766 HORMAD1Q86X24 394 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 OR2T29Q8NH02 315 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 NMD3Q96D46 503 aaKnown RBP19.25■□□□□ 0.67
USP39-204ENST00000409766 HSH2DQ96JZ2 352 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 SLC35A5Q9BS91 424 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 AMBRA1Q9C0C7 1298 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 PITHD1Q9GZP4 211 aaPredicted RBP19.25■□□□□ 0.67
USP39-204ENST00000409766 NT5DC2Q9H857 520 aa19.25■□□□□ 0.67
USP39-204ENST00000409766 IFT80Q9P2H3 777 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms