RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OR10A4Q9H209 315 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 SFXN1Q9H9B4 322 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 PISDQ9UG56 409 aa8.15□□□□□ -1.11
SCN9A-203ENST00000409672 TEX13CA0A0J9YWL9 993 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 RCCD1A6NED2 376 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CCRL2O00421 344 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 BCKDHAP12694 445 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CLDN2P57739 230 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ATXN7L3Q14CW9 347 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 IFI44LQ53G44 452 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM31Q5JXX7 168 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ATAD3CQ5T2N8 411 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TTC27Q6P3X3 843 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 NUDT13Q86X67 352 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 EID2Q8N6I1 236 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 OR4K1Q8NGD4 311 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TRIB2Q92519 343 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CPT1BQ92523 772 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SPOCK2Q92563 424 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 C3orf49Q96BT1 292 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 FBXL8Q96CD0 374 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 IL1RAPQ9NPH3 570 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ICKQ9UPZ9 632 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 VWDEQ8N2E2 1590 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 A0A0U1RQK1 487 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 HSPB6O14558 160 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ARPC2O15144 300 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 RPL11P62913 178 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 EEF1A1P5Q5VTE0 462 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TPGS2Q68CL5 300 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ZYG11AQ6WRX3 759 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CREG2Q8IUH2 290 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ELMOD2Q8IZ81 293 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF775Q96BV0 537 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 DNAJC19Q96DA6 116 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SLC25A44Q96H78 314 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SLC6A7Q99884 636 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 RAB11FIP5Q9BXF6 653 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 FAM117AQ9C073 453 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SLC2A6Q9UGQ3 507 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SPIN1Q9Y657 262 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PIAS3Q9Y6X2 628 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 AHSA1O95433 338 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 XIAPP98170 497 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ATXN2LQ8WWM7 1075 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TINAGL1Q9GZM7 467 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 KCMF1Q9P0J7 381 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ZNF282Q9UDV7 671 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ILVBLA1L0T0 632 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ABLIM1O14639 778 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 LRCH4O75427 683 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 C6orf47O95873 294 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 NUDT6P53370 316 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TMEM17Q86X19 198 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SRA1Q9HD15 236 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 NOP16Q9Y3C1 178 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 LOC730098B7Z3J9 87 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PTGER3P43115 390 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PSMD7P51665 324 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PRMT2P55345 433 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 MANEAQ5SRI9 462 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CLEC20AQ6ZU45 233 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PRELID2Q8N945 189 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PTRH2Q9Y3E5 179 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 RFXAPO00287 272 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 S100A2P29034 98 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 GNG2P59768 71 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 RPS3AP61247 264 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CCDC88AQ3V6T2 1871 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 FCRLBQ6BAA4 426 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 GPR137CQ8N3F9 429 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 LSM14AQ8ND56 463 aaKnown RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 GNB3P16520 340 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 FGL2Q14314 439 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 FBXL22Q6P050 247 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 AQP11Q8NBQ7 271 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TTLQ8NG68 377 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 OR6Q1Q8NGQ2 317 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PCDH19Q8TAB3 1148 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 WDR20Q8TBZ3 569 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TUBGCP5Q96RT8 1024 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ATG5Q9H1Y0 275 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PRMT8Q9NR22 394 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 NANSQ9NR45 359 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 C1orf109Q9NX04 203 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 TAS2R1Q9NYW7 299 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 LMO7Q8WWI1 1683 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 LOC102723532A0A0G2JNH3 316 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 C2orf78A6NCI8 922 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 RAB27BO00194 218 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 CBFA2T3O75081 653 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 ARL2P36404 184 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 YBEYP58557 167 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 HHEXQ03014 270 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 DLX2Q07687 328 aaPredicted RBP8.14□□□□□ -1.11
SCN9A-203ENST00000409672 PLCXD2Q0VAA5 305 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 SQSTM1Q13501 440 aa8.14□□□□□ -1.11
SCN9A-203ENST00000409672 KIAA0895LQ68EN5 471 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms