RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 PLEKHM3Q6ZWE6 761 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 BPHLQ86WA6 291 aaPredicted RBP12.5□□□□□ -0.41
PTPRN-202ENST00000409251 UMODL1-AS1Q8N2C9 162 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 OR9Q2Q8NGE9 314 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 GRPEL2Q8TAA5 225 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 ARRDC2Q8TBH0 407 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 MYDGFQ969H8 173 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 CDKN2AIPNLQ96HQ2 116 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 MGLLQ99685 303 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 MCMBPQ9BTE3 642 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 ZNF556Q9HAH1 456 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 CCNB1IP1Q9NPC3 277 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 DNAJC27Q9NZQ0 273 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 TBX21Q9UL17 535 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 OR2A25A4D2G3 310 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 FAM227AF5H4B4 570 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 SLITRK5O94991 958 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 CDRT1O95170 752 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 PTPN2P17706 415 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 TACR1P25103 407 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 IRS1P35568 1242 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 CTSOP43234 321 aaPredicted RBP12.5□□□□□ -0.41
PTPRN-202ENST00000409251 SLC9A3P48764 834 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 ABATP80404 500 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 DDI2Q5TDH0 399 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 GOLGA7Q7Z5G4 137 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 RHBDF1Q96CC6 855 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 IMP4Q96G21 291 aaKnown RBP12.5□□□□□ -0.41
PTPRN-202ENST00000409251 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 ACAT2Q9BWD1 397 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 MKRN2Q9H000 416 aaKnown RBP12.5□□□□□ -0.41
PTPRN-202ENST00000409251 HDHD2Q9H0R4 259 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 C11orf49Q9H6J7 331 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 ZIM2Q9NZV7 527 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 SNTNA6NMZ2 147 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 C9P02748 559 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 FGF4P08620 206 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 SSTR2P30874 369 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 CRATP43155 626 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 PTPN5P54829 565 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 RAB8AP61006 207 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 PRSS48Q7RTY5 328 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 ENTHD1Q8IYW4 607 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 SLC39A11Q8N1S5 342 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 GPR156Q8NFN8 814 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 MRPS31Q92665 395 aaKnown RBP12.5□□□□□ -0.41
PTPRN-202ENST00000409251 KIAA1191Q96A73 305 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 TSGA13Q96PP4 275 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 AARSD1Q9BTE6 412 aaKnown RBP12.5□□□□□ -0.41
PTPRN-202ENST00000409251 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 SPATA2Q9UM82 520 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 RAI2Q9Y5P3 530 aa12.5□□□□□ -0.41
PTPRN-202ENST00000409251 A0A0X1KG70 313 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 M0R082 166 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 SCELO95171 688 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 CLEC2LP0C7M8 214 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 HOXD9P28356 352 aaPredicted RBP12.49□□□□□ -0.41
PTPRN-202ENST00000409251 HK3P52790 923 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 SCN1BQ07699 218 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 SNAPC1Q16533 368 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 GPAT3Q53EU6 434 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 ADGRF1Q5T601 910 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 KDELC1Q6UW63 502 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 HMGN2P46Q86SG4 172 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 SPERTQ8NA61 448 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 TMCO6Q96DC7 493 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
PTPRN-202ENST00000409251 ACTL8Q9H568 366 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 RLIMQ9NVW2 624 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 NEDD8-MDP1E9PL57 170 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 GBAP04062 536 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 GNPDA1P46926 289 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 UGT2B15P54855 530 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 FAM109BQ6ICB4 259 aaPredicted RBP12.49□□□□□ -0.41
PTPRN-202ENST00000409251 FAM151BQ6UXP7 276 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 PTCHD4Q6ZW05 846 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 COPS8Q99627 209 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 WACQ9BTA9 647 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 GPR63Q9BZJ6 419 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 MFSD1Q9H3U5 465 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 SMURF1Q9HCE7 757 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 DCAF13Q9NV06 445 aaKnown RBP12.49□□□□□ -0.41
PTPRN-202ENST00000409251 MCUBQ9NWR8 336 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 CD84Q9UIB8 345 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 PIPSLA2A3N6 862 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 RFXAPO00287 272 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 TNFRSF11BO00300 401 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 ANKRD28O15084 1053 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 RGS14O43566 566 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 HPRP00739 348 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 ENGP17813 658 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 FDXRP22570 491 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms