RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TBC1D1Q86TI0 1168 aaPredicted RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 CCDC25Q86WR0 208 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 GPSM1Q86YR5 675 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SIRT6Q8N6T7 355 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF740Q8NDX6 193 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 PLPP5Q8NEB5 264 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 OR1N1Q8NGS0 311 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 DNAJB8Q8NHS0 232 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 PRR7Q8TB68 274 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 M1APQ8TC57 530 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 FAR1Q8WVX9 515 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 UBE2E3Q969T4 207 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 GAL3ST3Q96A11 431 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 PEX11GQ96HA9 241 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 IMMP1LQ96LU5 166 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 MAGEB10Q96LZ2 347 aaPredicted RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 C5orf34Q96MH7 638 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 OR4K3Q96R72 315 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 BARD1Q99728 777 aaKnown RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 EFCAB11Q9BUY7 163 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 NT5DC2Q9H857 520 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SYNPO2LQ9H987 977 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 KCNK13Q9HB14 408 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 NMRAL1Q9HBL8 299 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 ZBTB20Q9HC78 741 aaPredicted RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 MMP25Q9NPA2 562 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 OLAHQ9NV23 265 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 DNAJC11Q9NVH1 559 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SLC22A14Q9Y267 594 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 SLC5A6Q9Y289 635 aa8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 USP9YO00507 2555 aaPredicted RBP8.57□□□□□ -1.04
SNORD88A-201ENST00000408314 ANKDD1BA6NHY2 528 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SYCE1LA8MT33 242 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PRAMEF2O60811 474 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CLEC3AO75596 197 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 STK16O75716 305 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SEC24DO94855 1032 aaPredicted RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CBX6O95503 412 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TUBB4AP04350 444 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF888P0CJ79 500 aaPredicted RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CCDC166P0CW27 439 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 C1GALT1C1LP0DN25 315 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 ITGAMP11215 1152 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CRABP2P29373 138 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SERPINB1P30740 379 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 GGT5P36269 586 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MAGEA4P43358 317 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SLC6A12P48065 614 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 OR4D2P58180 307 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SRSF1Q07955 248 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MRPL49Q13405 166 aaKnown RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF460Q14592 562 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SLMAPQ14BN4 828 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TGFBIQ15582 683 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PDK4Q16654 411 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 HIST2H2ACQ16777 129 aaPredicted RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SFT2D3Q587I9 215 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CATSPEREQ5SY80 951 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 HIST2H2AA3Q6FI13 130 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TRIM40Q6P9F5 258 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PAPD4Q6PIY7 484 aaKnown RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TMEM207Q6UWW9 146 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TMIGD1Q6UXZ0 262 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 RAPH1Q70E73 1250 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TAOK1Q7L7X3 1001 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 LRRC70Q7Z2Q7 622 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 ZNF572Q7Z3I7 529 aaPredicted RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PDSS2Q86YH6 399 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CEP97Q8IW35 865 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 TMEM151BQ8IW70 566 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PPM1NQ8N819 430 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 FAM98AQ8NCA5 519 aaKnown RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 SRFBP1Q8NEF9 429 aaKnown RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MNS1Q8NEH6 495 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 STAG3L4Q8TBR4 150 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 GRHL3Q8TE85 626 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 UTP15Q8TED0 518 aaKnown RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PSMF1Q92530 271 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 RHBDF1Q96CC6 855 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 C19orf60Q96EN9 201 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PSMG3-AS1Q96PY0 264 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MACROD1Q9BQ69 325 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MCMBPQ9BTE3 642 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 NPLQ9BXD5 320 aaPredicted RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 ROGDIQ9GZN7 287 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 COPS7BQ9H9Q2 264 aaPredicted RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PRM3Q9NNZ6 103 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 STMN3Q9NZ72 180 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 GRHL1Q9NZI5 618 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 NUDT4Q9NZJ9 180 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 CD274Q9NZQ7 290 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MTRF1LQ9UGC7 380 aaKnown RBP8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 RNF112Q9ULX5 631 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MMACHCQ9Y4U1 282 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 PCDHGB6Q9Y5F9 930 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 MAST4O15021 2626 aa8.56□□□□□ -1.04
SNORD88A-201ENST00000408314 A0A1B0GUH1 482 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms