RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 RNF220Q5VTB9 566 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 TMEM214Q6NUQ4 689 aaKnown RBP23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 PAGE2Q7Z2X7 111 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 TRIM69Q86WT6 500 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 OR52E1Q8NGJ3 308 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 ZFP90Q8TF47 636 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 ADI1Q9BV57 179 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 CD93Q9NPY3 652 aa23.61■■□□□ 1.37
DNMT3A-206ENST00000406659 TCRBV21S2A2A0A5A6 115 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 LRRC72A6NJI9 287 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 PLPP1O14494 284 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 KDM1AO60341 852 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 GPR37L1O60883 481 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 TPP2P29144 1249 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 TPMTP51580 245 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 CSNK1G2P78368 415 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 NFATC4Q14934 902 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 LRRC23Q53EV4 343 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 PTOV1Q86YD1 416 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 GOT1L1Q8NHS2 421 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 CYGBQ8WWM9 190 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 OR1E3Q8WZA6 343 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 QRFPRQ96P65 431 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 SMPD3Q9NY59 655 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 CA5BQ9Y2D0 317 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 GMEB1Q9Y692 573 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 ZNF682O95780 498 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 C6orf47O95873 294 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 NTRK1P04629 796 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 VAC14Q08AM6 782 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 OTUD3Q5T2D3 398 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 TBPL2Q6SJ96 375 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 PGBD3Q8N328 593 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 OR2A1Q8NGT9 310 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 CIDECQ96AQ7 238 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 SDCCAG3Q96C92 435 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 WDR92Q96MX6 357 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 DPH2Q9BQC3 489 aaPredicted RBP23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 FAM192AQ9GZU8 254 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 MIEF1Q9NQG6 463 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 UTS2RQ9UKP6 389 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 ICKQ9UPZ9 632 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 COLEC10Q9Y6Z7 277 aa23.6■■□□□ 1.37
DNMT3A-206ENST00000406659 PLOD2O00469 737 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 APBB3O95704 486 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 TBX6O95947 436 aaPredicted RBP23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 SMIM18P0DKX4 95 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 HNRNPA2B1P22626 353 aaKnown RBP23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 GAB1Q13480 694 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 RGNQ15493 299 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 ADHFE1Q8IWW8 467 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 CLEC4FQ8N1N0 589 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 SYNPOQ8N3V7 929 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 DHRSXQ8N5I4 330 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 TRIML2Q8N7C3 387 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 PNPLA3Q9NST1 481 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 RPS6KA6Q9UK32 745 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 MMP17Q9ULZ9 603 aa23.59■■□□□ 1.37
DNMT3A-206ENST00000406659 GLULP15104 373 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 HTR1BP28222 390 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 KDELR2P33947 212 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 BSGP35613 385 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 MAPK12P53778 367 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 HBA1P69905 142 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 ADRM1Q16186 407 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 RD3Q7Z3Z2 195 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 STK32CQ86UX6 486 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 ZDHHC13Q8IUH4 622 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 RGMAQ96B86 450 aa23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 MRPS26Q9BYN8 205 aaKnown RBP23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 MRPS30Q9NP92 439 aaKnown RBP23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 SCHIP1Q9P0W5 487 aaPredicted RBP23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 WBP11Q9Y2W2 641 aaKnown RBP23.58■■□□□ 1.37
DNMT3A-206ENST00000406659 G3V2T6 193 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 H0Y8X5 98 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 RTCAO00442 366 aaKnown RBP23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 CAPN5O15484 640 aaPredicted RBP23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 VEZF1Q14119 521 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 SLC36A3Q495N2 470 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 ZCCHC7Q8N3Z6 543 aaKnown RBP23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 SVOPLQ8N434 492 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 FAM3CQ92520 227 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 PDXPQ96GD0 296 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 BMFQ96LC9 184 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 BRWD1Q9NSI6 2320 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 PRAMEF33A0A0G2JMD5 474 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 A0A1W2PRB8 838 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 TRBC2A0A5B9 178 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 NDUFS4O43181 175 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 LCMT2O60294 686 aaKnown RBP23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 SERPIND1P05546 499 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 GABRG2P18507 467 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 MYF6P23409 242 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 GRK3P35626 688 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 CAPGP40121 348 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 ALDH3A2P51648 485 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 DAG1Q14118 895 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 TMEM31Q5JXX7 168 aa23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.57■■□□□ 1.36
DNMT3A-206ENST00000406659 ANGPTL8Q6UXH0 198 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms