RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PTGDR2Q9Y5Y4 395 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 NLRC5Q86WI3 1866 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 NPEPPSL1A6NEC2 478 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 C2CD4BA6NLJ0 364 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 BHMG1C9JSJ3 638 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 YKT6O15498 198 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ARPC5O15511 151 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ZNF35P13682 527 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 CAPN3P20807 821 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 L1CAMP32004 1257 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 OMPP47874 163 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 TGM4P49221 684 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ARHGDIBP52566 201 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 SMIM11AP58511 58 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 FAM189BP81408 668 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 FLI1Q01543 452 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 RGS1Q08116 209 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 SLC10A2Q12908 348 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 SNTB2Q13425 540 aaKnown RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 C21orf62-AS1Q17RA5 79 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 VMACQ2NL98 169 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 COL28A1Q2UY09 1125 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 KRBOX4Q5JUW0 171 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 CATSPEREQ5SY80 951 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 BRAT1Q6PJG6 821 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ZNF367Q7RTV3 350 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ZNF557Q8N988 423 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 COQ8BQ96D53 544 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 LINGO1Q96FE5 620 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 FCRL4Q96PJ5 515 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 KLHL5Q96PQ7 755 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 HTATIP2Q9BUP3 242 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 FNDC11Q9BVV2 318 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 FAM126AQ9BYI3 521 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 IPPKQ9H8X2 491 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 EIF2B3Q9NR50 452 aaKnown RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 FBXO8Q9NRD0 319 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ZSCAN32Q9NX65 697 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 DNAJC27Q9NZQ0 273 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 ZIM2Q9NZV7 527 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 GALPQ9UBC7 116 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 EVLQ9UI08 416 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-203ENST00000406072 EMCNQ9ULC0 261 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 CA5BQ9Y2D0 317 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 POFUT2Q9Y2G5 429 aa5.67□□□□□ -1.5
HDAC9-203ENST00000406072 MYO18AQ92614 2054 aaKnown RBP5.66□□□□□ -1.5
HDAC9-203ENST00000406072 IRGMA1A4Y4 181 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 LACTBL1A8MY62 500 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 G3V2L1 256 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 RGS13O14921 159 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ENDOD1O94919 500 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 SPDEFO95238 335 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 CXCL10P02778 98 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ALDOBP05062 364 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 H2AFB2P0C5Z0 115 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 RD3LP0DJH9 198 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 HOXA11P31270 313 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-203ENST00000406072 RYKP34925 604 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 CLCN3P51790 818 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ATXN1P54253 815 aaKnown RBP5.66□□□□□ -1.5
HDAC9-203ENST00000406072 C1QTNF8P60827 252 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 PITPNAQ00169 270 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 GALK2Q01415 458 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 IRF8Q02556 426 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 BCL2L1Q07817 233 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 AQP6Q13520 282 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 DUSP7Q16829 419 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 EXOC3L2Q2M3D2 409 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 KLHL26Q53HC5 615 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 BRMS1LQ5PSV4 323 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 UBXN11Q5T124 520 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 SLC27A1Q6PCB7 646 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ALKAL2Q6UX46 152 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 MAVSQ7Z434 540 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 RNF180Q86T96 592 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ZSWIM9Q86XI8 627 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 CHPFQ8IZ52 775 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 CRIPAKQ8N1N5 446 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 THEM5Q8N1Q8 247 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 LRRC52Q8N7C0 313 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 SAMD12Q8N8I0 201 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 INO80EQ8NBZ0 244 aaPredicted RBP5.66□□□□□ -1.5
HDAC9-203ENST00000406072 OR4A15Q8NGL6 344 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 NANPQ8TBE9 248 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 NR4A3Q92570 626 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 SPACA7Q96KW9 195 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 FOPNLQ96NB1 174 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 CDK15Q96Q40 435 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 TCEAL7Q9BRU2 100 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ZNF350Q9GZX5 532 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 POLR2J3Q9H1A7 115 aaKnown RBP5.66□□□□□ -1.5
HDAC9-203ENST00000406072 MTG2Q9H4K7 406 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ZNF768Q9H5H4 540 aaKnown RBP5.66□□□□□ -1.5
HDAC9-203ENST00000406072 TPT1P8Q9HAU6 139 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 PRDM8Q9NQV8 689 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 RNF19AQ9NV58 838 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 ANGPT4Q9Y264 503 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 PLEKHA6Q9Y2H5 1048 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 NINQ8N4C6 2090 aa5.66□□□□□ -1.5
HDAC9-203ENST00000406072 CIB4A0PJX0 185 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms