RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 PEX5LQ8IYB4 626 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 C8orf59Q8N0T1 100 aaPredicted RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 GJD3Q8N144 294 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 OR13H1Q8NG92 308 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 RSPRY1Q96DX4 576 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 ALG14Q96F25 216 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 SLC6A18Q96N87 628 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 CHID1Q9BWS9 393 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 EBF2Q9HAK2 575 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 CPNE7Q9UBL6 633 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 COLQQ9Y215 455 aaPredicted RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 TESMINQ9Y4I5 508 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 SPTBN2O15020 2390 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 MYOCOSA0A1B0GUC4 107 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 TMEM202A6NGA9 273 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 DUXAA6NLW8 204 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 NARSO43776 548 aaKnown RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 CNOT3O75175 753 aaKnown RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 IGHA2P01877 340 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 SYPP08247 313 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 JMJD7P0C870 316 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 MASP1P48740 699 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 ACTR3P61158 418 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 RPS15AP62244 130 aaKnown RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 HTR4Q13639 388 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 PLXDC1Q8IUK5 500 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 ZDHHC21Q8IVQ6 265 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 KLHDC8AQ8IYD2 350 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 CHCHD4Q8N4Q1 142 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 DNAJC5GQ8N7S2 189 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 CANT1Q8WVQ1 401 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 BATF3Q9NR55 127 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 TMEM184CQ9NVA4 438 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 DNAAF2Q9NVR5 837 aaKnown RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 ACTR10Q9NZ32 417 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 TAAR2Q9P1P5 351 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 G3V2T6 193 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 ARPC2O15144 300 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 MBTPS2O43462 519 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 DFNA5O60443 496 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 HIST1H2ABP04908 130 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 FABP3P05413 133 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 FGF4P08620 206 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 PVRP15151 417 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 RPL4P36578 427 aaKnown RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 ATP4BP51164 291 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 MTTPP55157 894 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 TFF2Q03403 129 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 FCHO2Q0JRZ9 810 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 SCARB2Q14108 478 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 IFI44LQ53G44 452 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 HIST3H2AQ7L7L0 130 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 OXR1Q8N573 874 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 DENND6BQ8NEG7 585 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 OR52L1Q8NGH7 329 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 OR10Q1Q8NGQ4 319 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 ZNF483Q8TF39 744 aaPredicted RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 MZB1Q8WU39 189 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 LRTOMTQ8WZ04 291 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 RAB8BQ92930 207 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 HIST1H2ACQ93077 130 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 THAP11Q96EK4 314 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 PDXPQ96GD0 296 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 TEFMQ96QE5 360 aaKnown RBP8.74□□□□□ -1.01
LIG4-202ENST00000405925 FAM129BQ96TA1 746 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 OR8D2Q9GZM6 311 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 ANKMY1Q9P2S6 941 aa8.74□□□□□ -1.01
LIG4-202ENST00000405925 PRMT3O60678 531 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 BCHEP06276 602 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 JAK1P23458 1154 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PSMB9P28065 219 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CDH12P55289 794 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CDK6Q00534 326 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ABHD18Q0P651 414 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 GPR68Q15743 365 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 SBSNQ6UWP8 590 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ZNF605Q86T29 641 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 DCP2Q8IU60 420 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 SLC22A15Q8IZD6 547 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ADCY4Q8NFM4 1077 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 OR4K14Q8NGD5 310 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 DOK4Q8TEW6 326 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 OR1E3Q8WZA6 343 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ZFYVE21Q9BQ24 234 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 MACROD1Q9BQ69 325 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CCDC106Q9BWC9 280 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 C20orf27Q9GZN8 174 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 OR6C2Q9NZP2 312 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PDP1Q9P0J1 537 aaPredicted RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 PDP2Q9P2J9 529 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 FTSJ1Q9UET6 329 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PTBP2Q9UKA9 531 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 M0QX08 132 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 M0R3G1 203 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TPST2O60704 377 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 MOSPD3O75425 235 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ALOX5P09917 674 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ALOX12P18054 663 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 NELFEP18615 380 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 TCEA1P23193 301 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms