RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 RPS13P62277 151 aaKnown RBP12.52□□□□□ -0.41
PRAME-203ENST00000402697 NTHL1P78549 312 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 CAMK2GQ13555 558 aaPredicted RBP12.52□□□□□ -0.41
PRAME-203ENST00000402697 SLC44A4Q53GD3 710 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 PRSS36Q5K4E3 855 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 SYTL1Q8IYJ3 562 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 DEPDC4Q8N2C3 294 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 METTL4Q8N3J2 472 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 CELF5Q8N6W0 485 aaKnown RBP12.52□□□□□ -0.41
PRAME-203ENST00000402697 CNIH3Q8TBE1 160 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 GIPC3Q8TF64 312 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 CHPT1Q8WUD6 406 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 NEIL2Q969S2 332 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 CSF3RQ99062 836 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.41
PRAME-203ENST00000402697 TRIM39Q9HCM9 518 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 DMRT3Q9NQL9 472 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 GIN1Q9NXP7 522 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 SH3BP4Q9P0V3 963 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 ICKQ9UPZ9 632 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 POFUT2Q9Y2G5 429 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 RWDD3Q9Y3V2 267 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 HCFC2Q9Y5Z7 792 aa12.52□□□□□ -0.41
PRAME-203ENST00000402697 NUP210Q8TEM1 1887 aaPredicted RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 PCM1Q15154 2024 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 ARRDC5A6NEK1 342 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 LILRB5O75023 590 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 MITFO75030 526 aaPredicted RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 FURINP09958 794 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 EPCAMP16422 314 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 PREPP48147 710 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 TBPL1P62380 186 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 RPP38P78345 283 aaKnown RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 SIM2Q14190 667 aaPredicted RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 ARHGAP19Q14CB8 494 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 EIF4HQ15056 248 aaKnown RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 DHCR24Q15392 516 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 CRB2Q5IJ48 1285 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 PDE12Q6L8Q7 609 aaKnown RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 NXPE4Q6UWF7 544 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 PARS2Q7L3T8 475 aaKnown RBP12.51□□□□□ -0.41
PRAME-203ENST00000402697 VTCN1Q7Z7D3 282 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 GALNT5Q7Z7M9 940 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 TMPRSS11BQ86T26 416 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 KRT78Q8N1N4 520 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 ZNF540Q8NDQ6 660 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 SLC5A11Q8WWX8 675 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 MYDGFQ969H8 173 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 PPCDCQ96CD2 204 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 DGCR6LQ9BY27 220 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 ERVK-11Q9UQG0 969 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
PRAME-203ENST00000402697 M0R3G1 203 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 YY2O15391 372 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 FAM20BO75063 409 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 SEMA3DO95025 777 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 INMTO95050 263 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ETHE1O95571 254 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ZBTB11O95625 1053 aaPredicted RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 B3GALT4O96024 378 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 NTRK1P04629 796 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 PPP1R8Q12972 351 aaKnown RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 UBE2UQ5VVX9 321 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ANKRD34AQ69YU3 496 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 FAM71E1Q6IPT2 247 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 LCTLQ6UWM7 567 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 FAM92BQ6ZTR7 304 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 COMMD6Q7Z4G1 85 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 P2RY8Q86VZ1 359 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 P3H2Q8IVL5 708 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 DENND6BQ8NEG7 585 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 CDC26Q8NHZ8 85 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 CYB5D2Q8WUJ1 264 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 GEMIN6Q8WXD5 167 aaKnown RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 OR8D1Q8WZ84 308 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ZNF764Q96H86 408 aaPredicted RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 TPD52L3Q96J77 140 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 CCDC177Q9NQR7 707 aaPredicted RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 TAS2R9Q9NYW1 312 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ERVK-18Q9QC07 812 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ERGIC3Q9Y282 383 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 DNMT3AQ9Y6K1 912 aaPredicted RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 CEP290O15078 2479 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 C2orf16Q68DN1 1984 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 EDDM13A0A1B0GTR0 161 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 PIPSLA2A3N6 862 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 RPN2P04844 631 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ADH5P11766 374 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 ZNF8P17098 575 aaPredicted RBP12.5□□□□□ -0.41
PRAME-203ENST00000402697 CXCR2P25025 360 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 GGT2P36268 569 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 HMGA2P52926 109 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 TUBA1BP68363 451 aa12.5□□□□□ -0.41
PRAME-203ENST00000402697 SLBPQ14493 270 aaKnown RBP eCLIP12.5□□□□□ -0.41
PRAME-203ENST00000402697 CLCA4Q14CN2 919 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms