RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 HOXB9P17482 250 aaPredicted RBP16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 GRK5P34947 590 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 CBSP35520 551 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 MAPK8P45983 427 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 RAE1P78406 368 aaKnown RBP16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 KCNJ10P78508 379 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 SRSF11Q05519 484 aaKnown RBP16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 CBLL1Q75N03 491 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 TRMT11Q7Z4G4 463 aaKnown RBP16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 PALMDQ9NP74 551 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 GON4LQ3T8J9 2241 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 GFYI3L273 518 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 RFXAPO00287 272 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 PCDH17O14917 1159 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 AIREO43918 545 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 GPX2P18283 190 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 MAGEA2P43356 314 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 HTRA3P83110 453 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 TCEA2Q15560 299 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 EXOC3L2Q2M3D2 409 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 RNF130Q86XS8 419 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 SLC39A11Q8N1S5 342 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 ITPKCQ96DU7 683 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 CEP295NLQ96MC4 621 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 Q96MT0 163 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 IL4I1Q96RQ9 567 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 MROQ9BYG7 248 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 ADPRHL2Q9NX46 363 aa16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 NDRG4Q9ULP0 352 aaKnown RBP16.38■□□□□ 0.21
SNRNP70-202ENST00000401730 SCAMP2O15127 329 aaKnown RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 TPST2O60704 377 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 GCM2O75603 506 aaPredicted RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 KLK1P06870 262 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 IGFBP1P08833 259 aaPredicted RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 ITGAMP11215 1152 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 CHI3L1P36222 383 aaPredicted RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 ALDH9A1P49189 494 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 C2orf80Q0P641 193 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 LEXMQ3ZCV2 418 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 CAPN13Q6MZZ7 669 aaPredicted RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 FAM124AQ86V42 546 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 NPAS3Q8IXF0 933 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 CNDP2Q96KP4 475 aaKnown RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 SLC35A5Q9BS91 424 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 ASIC5Q9NY37 505 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 RUVBL1Q9Y265 456 aaKnown RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 THSD7BQ9C0I4 1608 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 AGAP14A8MT82 685 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 SOX14O95416 240 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 IMPA1P29218 277 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 TRPC1P48995 793 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 HNMTP50135 292 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 RPS26P11Q5JNZ5 115 aaPredicted RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 TSEN54Q7Z6J9 526 aaKnown RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 OR10G2Q8NGC3 310 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 WDR20Q8TBZ3 569 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 AP2M1Q96CW1 435 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 ZNF300Q96RE9 604 aaPredicted RBP16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 AKIP1Q9NQ31 210 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 GPATCH2Q9NW75 528 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 NOX1Q9Y5S8 564 aa16.37■□□□□ 0.21
SNRNP70-202ENST00000401730 C9P02748 559 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 SELENBP1Q13228 472 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 SLBPQ14493 270 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TEAD2Q15562 447 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TIGD6Q17RP2 521 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 DEPDC1Q5TB30 811 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TNFAIP8L2Q6P589 184 aaPredicted RBP16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 FAM217AQ8IXS0 508 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TCEAL8Q8IYN2 117 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 LGI4Q8N135 537 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 STX19Q8N4C7 294 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 FAM83FQ8NEG4 500 aaPredicted RBP16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 VPS37AQ8NEZ2 397 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 YIPF6Q96EC8 236 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 C7orf34Q96L11 122 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TSEN34Q9BSV6 310 aaKnown RBP16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 OR2AG1Q9H205 316 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 RETREG1Q9H6L5 497 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 CTPS2Q9NRF8 586 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 NDUFAF4Q9P032 175 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 PNMA8CA0A1B0GUJ8 204 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 CTSLP07711 333 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 IDSP22304 550 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TAS2R50P59544 299 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 MESP2Q0VG99 397 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 PPIGQ13427 754 aaKnown RBP eCLIP16.36■□□□□ 0.213e-15■■□□□ 13.8
SNRNP70-202ENST00000401730 MED22Q15528 200 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 HTR3DQ70Z44 454 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 BCDIN3DQ7Z5W3 292 aaKnown RBP16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 C11orf96Q7Z7L8 435 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 ATG2BQ96BY7 2078 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 PRAMEF25A6NGN4 478 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 SCAMP1O15126 338 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TLL1O43897 1013 aa16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 TMEM115Q12893 351 aaPredicted RBP16.36■□□□□ 0.21
SNRNP70-202ENST00000401730 PRSS53Q2L4Q9 553 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms