RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 TMEM164Q5U3C3 297 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ATG16L1Q676U5 607 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 CYB5D1Q6P9G0 228 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 TTLL10Q6ZVT0 673 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 CLYBLQ8N0X4 340 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ARFGAP2Q8N6H7 521 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 SELENOMQ8WWX9 145 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 MS4A6EQ96DS6 147 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 SMIM10Q96HG1 83 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 MAGEB10Q96LZ2 347 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 TEFMQ96QE5 360 aaKnown RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ZPBPQ9BS86 351 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 MS4A8Q9BY19 250 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 SLC29A3Q9BZD2 475 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ACTR5Q9H9F9 607 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 CUTCQ9NTM9 273 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 HAO1Q9UJM8 370 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 PTGDR2Q9Y5Y4 395 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 MGAQ8IWI9 3026 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 SAP18O00422 153 aaKnown RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 TXNDC9O14530 226 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 STK17BO94768 372 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 RBMS1P29558 406 aaKnown RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 GUCY1A3Q02108 690 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 FAM214AQ32MH5 1076 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 DEPDC1Q5TB30 811 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 KANK2Q63ZY3 851 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 RHBDD2Q6NTF9 364 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 TIPARPQ7Z3E1 657 aaKnown RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 UBE3DQ7Z6J8 389 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 TRIM42Q8IWZ5 723 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 UTP15Q8TED0 518 aaKnown RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 REPS1Q96D71 796 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 NXPE2Q96DL1 559 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 NDC1Q9BTX1 674 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 REXO4Q9GZR2 422 aaKnown RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 ILKAPQ9H0C8 392 aaPredicted RBP15.16■□□□□ 0.02
HMGA1-204ENST00000401473 PNPOQ9NVS9 261 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 RAP2CQ9Y3L5 183 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 PCDHGA7Q9Y5G6 932 aa15.16■□□□□ 0.02
HMGA1-204ENST00000401473 C1QTNF9BB2RNN3 333 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 DNAJB6O75190 326 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 KRT6AP02538 564 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 KRT6BP04259 564 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 C1QTNF9P0C862 333 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 RORAP35398 523 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 KRT6CP48668 564 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 RAB8AP61006 207 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 C1orf189Q5VU69 101 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 LCN10Q6JVE6 187 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 PDSS2Q86YH6 399 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 AFAP1L2Q8N4X5 818 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 ZCCHC10Q8TBK6 192 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 LRRC8CQ8TDW0 803 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 MAGEB18Q96M61 343 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 B3GNT4Q9C0J1 378 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 PSD3Q9NYI0 1048 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 ADGRE2Q9UHX3 823 aa15.15■□□□□ 0.02
HMGA1-204ENST00000401473 A0A0G2JN53 185 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 JUNP05412 331 aaKnown RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF888P0CJ79 500 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 IL1RNP18510 177 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ITGAXP20702 1163 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 PTX3P26022 381 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 PLA2G16P53816 162 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 GYS2P54840 703 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 EMP3P54852 163 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 RGS1Q08116 209 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 FAM53BQ14153 422 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 MUM1Q2TAK8 710 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 TOR1AIP1Q5JTV8 583 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 GARNL3Q5VVW2 1013 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 KHDRBS2Q5VWX1 349 aaKnown RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ZNF385CQ66K41 422 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ZFAND4Q86XD8 727 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 METTL27Q8N6F8 245 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 CLIP3Q96DZ5 547 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 CMTM7Q96FZ5 175 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 GBP5Q96PP8 586 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 NLNQ9BYT8 704 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ACPTQ9BZG2 426 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 LHX9Q9NQ69 397 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 PPT2Q9UMR5 302 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 CCL27Q9Y4X3 112 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 SLC22A7Q9Y694 548 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 A0A0A6YYC8 382 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 I3L1I5 382 aaPredicted RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 MEN1O00255 615 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 RTCAO00442 366 aaKnown RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 CRCPO75575 148 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 DLGAP3O95886 979 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 SERPINB1P30740 379 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 RPL14P50914 215 aaKnown RBP15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ARSFP54793 590 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 HMGCS1Q01581 520 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 DEFB134Q4QY38 66 aa15.14■□□□□ 0.01
HMGA1-204ENST00000401473 ABHD17CQ6PCB6 329 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms