RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 LINC00271P0C7V0 271 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 CTSAP10619 480 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 EIF2DP41214 584 aaKnown RBP24.59■■□□□ 1.53
COL13A1-203ENST00000398969 MAPK11Q15759 364 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 Q6ZVL8 140 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 SLC5A8Q8N695 610 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 OR7G3Q8NG95 312 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 HUS1BQ8NHY5 278 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 MYDGFQ969H8 173 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 DACH2Q96NX9 599 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 SMG9Q9H0W8 520 aaKnown RBP24.59■■□□□ 1.53
COL13A1-203ENST00000398969 FKBP14Q9NWM8 211 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 SH3BP4Q9P0V3 963 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 ZNF282Q9UDV7 671 aaPredicted RBP24.59■■□□□ 1.53
COL13A1-203ENST00000398969 TGM5O43548 720 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 CNOT3O75175 753 aaKnown RBP24.59■■□□□ 1.53
COL13A1-203ENST00000398969 OPN1SWP03999 348 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 ZNF30P17039 623 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 GJA1P17302 382 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 TNFRSF1BP20333 461 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 MVDP53602 400 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 PCDH1Q08174 1060 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 SPIN4Q56A73 249 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 SLC22A16Q86VW1 577 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 CCDC103Q8IW40 242 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 KLHDC8AQ8IYD2 350 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 OR10G2Q8NGC3 310 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 AMBNQ9NP70 447 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 POLE4Q9NR33 117 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 GPATCH2Q9NW75 528 aa24.59■■□□□ 1.53
COL13A1-203ENST00000398969 EXO1Q9UQ84 846 aaKnown RBP24.59■■□□□ 1.53
COL13A1-203ENST00000398969 RNASET2O00584 256 aaKnown RBP24.58■■□□□ 1.53
COL13A1-203ENST00000398969 TIA1P31483 386 aaKnown RBP eCLIP24.58■■□□□ 1.53
COL13A1-203ENST00000398969 BDKRB1P46663 353 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 TIGD6Q17RP2 521 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 ZNF404Q494X3 552 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 SYTL3Q4VX76 610 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 DSG4Q86SJ6 1040 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 PSMA8Q8TAA3 256 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 GGHQ92820 318 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 MMP27Q9H306 513 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 PRM3Q9NNZ6 103 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 RLIMQ9NVW2 624 aa24.58■■□□□ 1.53
COL13A1-203ENST00000398969 GNG14A0A1W2PPG7 69 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 CLCA1A8K7I4 914 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 TSPAN6O43657 245 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 CDK1P06493 297 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 HLA-EP13747 358 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 GADD45AP24522 165 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 IMPA1P29218 277 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 ETV3P41162 512 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 CRATP43155 626 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 PREPP48147 710 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 DCDC1P59894 354 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF385BQ569K4 471 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 COX20Q5RI15 118 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF852Q6ZMS4 543 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 TMC8Q8IU68 726 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 OR4C15Q8NGM1 316 aa24.58■■□□□ 1.52
COL13A1-203ENST00000398969 SCHIP1Q9P0W5 487 aaPredicted RBP24.58■■□□□ 1.52
COL13A1-203ENST00000398969 DENND4CQ5VZ89 1909 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 TRAV19A0A0A6YYK7 116 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 METTL15A6NJ78 407 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 FADS2P1A8MWK0 482 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 SLC16A8O95907 504 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 VIPR1P32241 457 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 CTSKP43235 329 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 CASP9P55211 416 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 HTRA4P83105 476 aaPredicted RBP24.57■■□□□ 1.52
COL13A1-203ENST00000398969 ANGPTL8Q6UXH0 198 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 LILRA3Q8N6C8 439 aaPredicted RBP24.57■■□□□ 1.52
COL13A1-203ENST00000398969 OR56A3Q8NH54 315 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 PCDHGA2Q9Y5H1 932 aa24.57■■□□□ 1.52
COL13A1-203ENST00000398969 ETFAP13804 333 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 RPS13P62277 151 aaKnown RBP24.56■■□□□ 1.52
COL13A1-203ENST00000398969 RAVER1Q8IY67 606 aaKnown RBP24.56■■□□□ 1.52
COL13A1-203ENST00000398969 OR2A12Q8NGT7 310 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 TMEM159Q96B96 161 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 PKP4Q99569 1192 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 RIOK2Q9BVS4 552 aaKnown RBP24.56■■□□□ 1.52
COL13A1-203ENST00000398969 PRDM8Q9NQV8 689 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 RAD18Q9NS91 495 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 SPASTQ9UBP0 616 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 TNFRSF21O75509 655 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 CATP04040 527 aaKnown RBP24.56■■□□□ 1.52
COL13A1-203ENST00000398969 CYP2A6P11509 494 aaPredicted RBP24.56■■□□□ 1.52
COL13A1-203ENST00000398969 BRAT1Q6PJG6 821 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 SLC46A3Q7Z3Q1 461 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 TRAM1L1Q8N609 369 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 OR52J3Q8NH60 311 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 FAM83CQ9BQN1 747 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 BHLHE41Q9C0J9 482 aaPredicted RBP24.56■■□□□ 1.52
COL13A1-203ENST00000398969 POFUT2Q9Y2G5 429 aa24.56■■□□□ 1.52
COL13A1-203ENST00000398969 PLXNA2O75051 1894 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 A0A1W2PRU2 124 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 ANXA8P13928 327 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 MAGEA10P43363 369 aaPredicted RBP24.55■■□□□ 1.52
COL13A1-203ENST00000398969 OR1E2P47887 323 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 CTSCP53634 463 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 HBA1P69905 142 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms