RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 NAT2P11245 290 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 EIF1P41567 113 aaKnown RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 OR3A3P47888 321 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 OR3A2P47893 321 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SEC24CP53992 1094 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 PRKAG1P54619 331 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 NOMO3P69849 1222 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 RUNX2Q13950 521 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 MAD2L1BPQ15013 274 aaPredicted RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 NOMO1Q15155 1222 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 TMEM201Q5SNT2 666 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ARHGAP40Q5TG30 622 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 MEDAGQ5VYS4 303 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 LIPJQ5W064 366 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 WDR88Q6ZMY6 472 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SLC47A2Q86VL8 602 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 MARVELD2Q8N4S9 558 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CCDC71LQ8N9Z2 235 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.64□□□□□ -1.992e-24■■■■■ 59.8
CHD9-202ENST00000398510 CHTF18Q8WVB6 975 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 TMEM43Q9BTV4 400 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 OR11A1Q9GZK7 315 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 FLRT1Q9NZU1 646 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SLC35A3Q9Y2D2 325 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CEP250Q9BV73 2442 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 BTBD19C9JJ37 291 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 E5RJQ4 531 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 LRRTM2O43300 516 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 UGT1A9O60656 530 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 B3GALNT1O75752 331 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 TGM6O95932 706 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 GNAO1P09471 354 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ABOP16442 354 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ALAS2P22557 587 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CRHR1P34998 444 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SOX11P35716 441 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 AFF1P51825 1210 aaKnown RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 HERV-K104P61576 105 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ADAM17P78536 824 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SPIBQ01892 262 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ST3GAL3Q11203 375 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 TRIM32Q13049 653 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 PUM1Q14671 1186 aaKnown RBP eCLIP2.64□□□□□ -1.995e-7■■□□□ 11.8
CHD9-202ENST00000398510 CA9Q16790 459 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 LY6KQ17RY6 165 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 RGS21Q2M5E4 152 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 TEX44Q53QW1 395 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SH3D19Q5HYK7 790 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 N4BP2L1Q5TBK1 243 aaPredicted RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 C15orf39Q6ZRI6 1047 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ESX1Q8N693 406 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 DENND6BQ8NEG7 585 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SMPDL3AQ92484 453 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SMARCD2Q92925 531 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 LRRC58Q96CX6 371 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 MOCOSQ96EN8 888 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 GLIS2Q9BZE0 524 aaPredicted RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 C1orf198Q9H425 327 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 UGT1A7Q9HAW7 530 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 UGT1A10Q9HAW8 530 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 UGT1A8Q9HAW9 530 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ABCB8Q9NUT2 735 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SLC9B1P1A6NJY1 282 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 FIGNL2A6NMB9 653 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 GABRR3A8MPY1 467 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 IDH3BO43837 385 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CLPXO76031 633 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 S1PR4O95977 384 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CRYABP02511 175 aaKnown RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 LINGO3P0C6S8 592 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 DLSTP36957 453 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CNTN2Q02246 1040 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ZNF91Q05481 1191 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 MINDY4Q4G0A6 757 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 LIN52Q52LA3 116 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 MANEAQ5SRI9 462 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 LYSMD4Q5XG99 296 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 WSCD1Q658N2 575 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CDCA2Q69YH5 1023 aaPredicted RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 NLRC3Q7RTR2 1065 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 DPPA2Q7Z7J5 298 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CMIPQ8IY22 773 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 IL17RCQ8NAC3 791 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 KIAA0895Q8NCT3 520 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 PROKR2Q8NFJ6 384 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 EPS8L1Q8TE68 723 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 PPP1R14BQ96C90 147 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 OR2M4Q96R27 311 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 EHD3Q9NZN3 535 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 GPR34Q9UPC5 381 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 R3HDM2Q9Y2K5 976 aaKnown RBP2.64□□□□□ -1.99
CHD9-202ENST00000398510 BACE2Q9Y5Z0 518 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SCN10AQ9Y5Y9 1956 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 ATP6AP2A0A1C7CYW4 349 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 HHLA1C9JL84 531 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 SLC22A1O15245 554 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 INPPL1O15357 1258 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 HDAC3O15379 428 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 FGF18O76093 207 aa2.64□□□□□ -1.99
CHD9-202ENST00000398510 CBX7O95931 251 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms