RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CEP104O60308 925 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 GALR3O60755 368 aaPredicted RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 URI1O94763 535 aaPredicted RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 KRT14P02533 472 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 CDH1P12830 882 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 GABRB3P28472 473 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 SSTR2P30874 369 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 CXCR5P32302 372 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 MAGEA3P43357 314 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 OR4D2P58180 307 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 BTG2P78543 158 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 MEF2AQ02078 507 aaPredicted RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 OC90Q02509 493 aaPredicted RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 PHKG1Q16816 387 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 LCTLQ6UWM7 567 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 CTAGE6Q86UF2 777 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 C17orf64Q86WR6 236 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 SLC35F6Q8N357 371 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 CPSF7Q8N684 471 aaKnown RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 SLC5A8Q8N695 610 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 ZNF740Q8NDX6 193 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 NFAM1Q8NET5 270 aaPredicted RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 ABHD11Q8NFV4 315 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 AGAP11Q8TF27 550 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
TFF3-202ENST00000398431 C14orf79Q96F83 325 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 SERPINB12Q96P63 405 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 OR4K3Q96R72 315 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 OR1F2PQ96R84 312 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 CCDC68Q9H2F9 335 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 PARVBQ9HBI1 364 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 COMMD10Q9Y6G5 202 aa11.29□□□□□ -0.6
TFF3-202ENST00000398431 E9PLN8 166 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 GOLGA8MH3BSY2 632 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 NDC80O14777 642 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 NME2P1O60361 137 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 MLYCDO95822 493 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 FHP07954 510 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 NME2P22392 152 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 TPP2P29144 1249 aaPredicted RBP11.28□□□□□ -0.6
TFF3-202ENST00000398431 MLF1P58340 268 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 GNG11P61952 73 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 OLR1P78380 273 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 HSP90AA5PQ58FG0 334 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 PAQR3Q6TCH7 311 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 LMNTD2Q8IXW0 634 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 GHDCQ8N2G8 530 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 ALKBH8Q96BT7 664 aaKnown RBP11.28□□□□□ -0.6
TFF3-202ENST00000398431 TBC1D20Q96BZ9 403 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 NDNQ99608 321 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 OLFM1Q99784 485 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 FAM129AQ9BZQ8 928 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 SPNS1Q9H2V7 528 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 HOMER3Q9NSC5 361 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 C20orf96Q9NUD7 363 aaPredicted RBP11.28□□□□□ -0.6
TFF3-202ENST00000398431 SAMD15Q9P1V8 674 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 AKAP9Q99996 3911 aa11.28□□□□□ -0.6
TFF3-202ENST00000398431 EFCAB8A8MWE9 144 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 SLC16A5O15375 505 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 B4GALT2O60909 372 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 SLC25A12O75746 678 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 TSPAN12O95859 305 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 C8GP07360 202 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 SMIM10L1P0DMW3 83 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 ABOP16442 354 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 ALOX12P18054 663 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 CAPN3P20807 821 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 TRHRP34981 398 aaPredicted RBP11.27□□□□□ -0.61
TFF3-202ENST00000398431 PTGER1P34995 402 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 NR0B1P51843 470 aaKnown RBP11.27□□□□□ -0.61
TFF3-202ENST00000398431 PGGT1BP53609 377 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 CDKN2DP55273 166 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 TAS2R50P59544 299 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 PWP1Q13610 501 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 HERC3Q15034 1050 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 DEFB134Q4QY38 66 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 RBM20Q5T481 1227 aaKnown RBP11.27□□□□□ -0.61
TFF3-202ENST00000398431 SPNS3Q6ZMD2 512 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 CEP97Q8IW35 865 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 MARVELD2Q8N4S9 558 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 HORMAD2Q8N7B1 307 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 NAT8LQ8N9F0 302 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 C2CD4AQ8NCU7 369 aaPredicted RBP11.27□□□□□ -0.61
TFF3-202ENST00000398431 OR56A3Q8NH54 315 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 PYCR2Q96C36 320 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 SNF8Q96H20 258 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 SMIM10Q96HG1 83 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 PTCHD1Q96NR3 888 aa11.27□□□□□ -0.61
TFF3-202ENST00000398431 XAB2Q9HCS7 855 aaKnown RBP11.27□□□□□ -0.61
TFF3-202ENST00000398431 IARS2Q9NSE4 1012 aaKnown RBP11.27□□□□□ -0.61
TFF3-202ENST00000398431 SETD2Q9BYW2 2564 aaPredicted RBP11.26□□□□□ -0.61
TFF3-202ENST00000398431 HCFC1P51610 2035 aa11.26□□□□□ -0.61
TFF3-202ENST00000398431 IGKV3D-11A0A0A0MRZ8 115 aa11.26□□□□□ -0.61
TFF3-202ENST00000398431 TRBC2A0A5B9 178 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms