RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 OTCP00480 354 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 SERPINB4P48594 390 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 CFAP157Q5JU67 520 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 ADNP2Q6IQ32 1131 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 C9orf43Q8TAL5 461 aaPredicted RBP24.18■■□□□ 1.46
U2AF1-203ENST00000398137 SLC13A3Q8WWT9 602 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 CLIP3Q96DZ5 547 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 LRFN5Q96NI6 719 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 NDC1Q9BTX1 674 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 PITHD1Q9GZP4 211 aaPredicted RBP24.18■■□□□ 1.46
U2AF1-203ENST00000398137 ZFP69BQ9UJL9 534 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 SRPK3Q9UPE1 567 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 POLHQ9Y253 713 aa24.18■■□□□ 1.46
U2AF1-203ENST00000398137 ASH1LQ9NR48 2969 aaKnown RBP24.17■■□□□ 1.46
U2AF1-203ENST00000398137 FITM1A5D6W6 292 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 NDUFS4O43181 175 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 UGDHO60701 494 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 TRIM13O60858 407 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 CLDN9O95484 217 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 CAPN1P07384 714 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 BPGMP07738 259 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 PTPN4P29074 926 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 AHRP35869 848 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 GCGRP47871 477 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 ASPHQ12797 758 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 LCP2Q13094 533 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 IL10RAQ13651 578 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 HIST2H2ACQ16777 129 aaPredicted RBP24.17■■□□□ 1.46
U2AF1-203ENST00000398137 LIPJQ5W064 366 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 HIST2H2AA3Q6FI13 130 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 MED27Q6P2C8 311 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 FRMD7Q6ZUT3 714 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 DSELQ8IZU8 1212 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 L3MBTL4Q8NA19 623 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 CAMKVQ8NCB2 501 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 OR4F6Q8NGB9 312 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 C10orf90Q96M02 699 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 NTMT1Q9BV86 223 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 GATA5Q9BWX5 397 aaPredicted RBP24.17■■□□□ 1.46
U2AF1-203ENST00000398137 NLNQ9BYT8 704 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 CHST8Q9H2A9 424 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 NT5DC2Q9H857 520 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 ENAMQ9NRM1 1142 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 CUTCQ9NTM9 273 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 DHCR7Q9UBM7 475 aaKnown RBP24.17■■□□□ 1.46
U2AF1-203ENST00000398137 ZNF490Q9ULM2 529 aaPredicted RBP24.17■■□□□ 1.46
U2AF1-203ENST00000398137 PCSK5Q92824 1860 aa24.17■■□□□ 1.46
U2AF1-203ENST00000398137 HYKKA2RU49 373 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 HMGB1P1B2RPK0 211 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-203ENST00000398137 MED26O95402 600 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 MLYCDO95822 493 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 SLC35G6P0C7Q6 338 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 PCNAP12004 261 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 NR1D1P20393 614 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 HPDP32754 393 aaPredicted RBP24.16■■□□□ 1.46
U2AF1-203ENST00000398137 HNF4AP41235 474 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 CPSF6Q16630 551 aaKnown RBP eCLIP24.16■■□□□ 1.46
U2AF1-203ENST00000398137 C1orf189Q5VU69 101 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 FAM219BQ5XKK7 198 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 LETMD1Q6P1Q0 360 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 ZCCHC23Q6ZST2 131 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 MILR1Q7Z6M3 343 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 MGARPQ8TDB4 240 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 CCT6BQ92526 530 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 MR1Q95460 341 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 TM4SF19Q96DZ7 209 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 ZNF382Q96SR6 550 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 GPR87Q9BY21 358 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 DRC3Q9H069 523 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 PRM3Q9NNZ6 103 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 SEC16AO15027 2179 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 MED13Q9UHV7 2174 aa24.16■■□□□ 1.46
U2AF1-203ENST00000398137 WDR91A4D1P6 747 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 MEN1O00255 615 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 TXNDC9O14530 226 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 DHRS4L1P0CG22 281 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 ATXN8OSP0DMR3 200 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 FAM69BQ5VUD6 431 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 GPRIN3Q6ZVF9 776 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 TTLL10Q6ZVT0 673 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 VN1R5Q7Z5H4 357 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 SYVN1Q86TM6 617 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 DTWD1Q8N5C7 304 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 KCT2Q8NC54 265 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 TTLQ8NG68 377 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 ZCCHC10Q8TBK6 192 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 UBE2E3Q969T4 207 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 PAIP2Q9BPZ3 127 aaKnown RBP24.15■■□□□ 1.46
U2AF1-203ENST00000398137 TRIM55Q9BYV6 548 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 EPN3Q9H201 632 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 TXLNGQ9NUQ3 528 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 NKIRAS1Q9NYS0 192 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 NDOR1Q9UHB4 597 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 TP53TG5Q9Y2B4 290 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 STK38LQ9Y2H1 464 aa24.15■■□□□ 1.46
U2AF1-203ENST00000398137 MRPS2Q9Y399 296 aaKnown RBP24.15■■□□□ 1.46
U2AF1-203ENST00000398137 RELNP78509 3460 aa24.14■■□□□ 1.46
U2AF1-203ENST00000398137 ANKDD1BA6NHY2 528 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 FFAR3O14843 346 aa24.14■■□□□ 1.45
U2AF1-203ENST00000398137 GPR42O15529 346 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms