RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IGSF11Q5DX21 431 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF691Q5VV52 312 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TIGD3Q6B0B8 471 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ADNP2Q6IQ32 1131 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TMEM65Q6PI78 240 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZSWIM9Q86XI8 627 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PTRH1Q86Y79 214 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF366Q8N895 744 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 OR8H1Q8NGG4 311 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 VANGL1Q8TAA9 524 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 CD99L2Q8TCZ2 262 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 UBASH3BQ8TF42 649 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DNAJA4Q8WW22 397 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLC38A4Q969I6 547 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 UBE2FQ969M7 185 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 NEDD4LQ96PU5 975 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MTERF1Q99551 399 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 DPH2Q9BQC3 489 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 NXF2Q9GZY0 626 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 RASSF1Q9NS23 344 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 C14orf119Q9NWQ9 140 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLC25A37Q9NYZ2 338 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF224Q9NZL3 707 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 GMEB2Q9UKD1 530 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TBC1D24Q9ULP9 559 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PCDHB14Q9Y5E9 798 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 A8MUA0 341 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 RGS5O15539 181 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CA12O43570 354 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 RGS10O43665 173 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PI15O43692 258 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MRPS14O60783 128 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 CPSF4O95639 269 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 PAHP00439 452 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 OTCP00480 354 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ESR1P03372 595 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MT-ND2P03891 347 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 GBAP04062 536 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ANXA6P08133 673 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PRR35P0CG20 571 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF30P17039 623 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 HMGA1P17096 107 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF7P17097 686 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 BPIP17213 487 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TNNI3P19429 210 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DDCP20711 480 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CTHP32929 405 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TIE1P35590 1138 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 HMGCLP35914 325 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ETV6P41212 452 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 RPIAP49247 311 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DGKEP52429 567 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 BCL2L1Q07817 233 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SCRN3Q0VDG4 424 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 NFATC2Q13469 925 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 NFE2L1Q14494 772 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 GPNMBQ14956 572 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 LEXMQ3ZCV2 418 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 CYP27C1Q4G0S4 372 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 INO80DQ53TQ3 878 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 SULT1C3Q6IMI6 304 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TYW3Q6IPR3 259 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 LAIR2Q6ISS4 152 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 NCEH1Q6PIU2 408 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 TXNDC11Q6PKC3 985 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PRSS42Q7Z5A4 293 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 RBM23Q86U06 439 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 LSRQ86X29 649 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 CHCHD4Q8N4Q1 142 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 GPR26Q8NDV2 337 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 PJA1Q8NG27 643 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 OR4M1Q8NGD0 313 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SELENOMQ8WWX9 145 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLC47A1Q96FL8 570 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MYO19Q96H55 970 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 APOLD1Q96LR9 279 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MAGEB10Q96LZ2 347 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 OR2A14Q96R47 310 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF382Q96SR6 550 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FAM126AQ9BYI3 521 aaPredicted RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 AMBRA1Q9C0C7 1298 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 AMBNQ9NP70 447 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ACOT13Q9NPJ3 140 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 FNIP2Q9P278 1114 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 METRNQ9UJH8 293 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 KLHL21Q9UJP4 597 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 MAFFQ9ULX9 164 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DIMT1Q9UNQ2 313 aaKnown RBP4.85□□□□□ -1.63
SSR1-202ENST00000397511 SLC22A14Q9Y267 594 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 DHRS7Q9Y394 339 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 ZNF175Q9Y473 711 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 HSPB11Q9Y547 144 aa4.85□□□□□ -1.63
SSR1-202ENST00000397511 GLYATL1P3A0A0U1RQE8 302 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 NPIPB15A6NHN6 443 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 PRSS47A8MTI9 375 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 BTN3A3O00478 584 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 CXCR6O00574 342 aa4.84□□□□□ -1.63
SSR1-202ENST00000397511 NRG2O14511 850 aaPredicted RBP4.84□□□□□ -1.63
SSR1-202ENST00000397511 STX16O14662 325 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms