RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 OR2L5Q8NG80 312 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 NTNG2Q96CW9 530 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 SPSB2Q99619 263 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 ACAT2Q9BWD1 397 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 SLC52A3Q9NQ40 469 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 RAP2CQ9Y3L5 183 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 LOC102723996A0A087X1L8 192 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 MAGEB17A8MXT2 336 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 TGFBR3LH3BV60 316 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 SHOX2O60902 331 aaPredicted RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 UMODP07911 640 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 CXCR2P25025 360 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 DEFB110Q30KQ9 67 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 EXOSC6Q5RKV6 272 aaKnown RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 ZCCHC23Q6ZST2 131 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 CHSY3Q70JA7 882 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 LARP4Q71RC2 724 aaKnown RBP eCLIP10.05□□□□□ -0.8
NUP98-205ENST00000397007 PLD3Q8IV08 490 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 ZC3H7AQ8IWR0 971 aaKnown RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 ARMC10Q8N2F6 343 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 ZNF781Q8N8C0 355 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 NXPE2Q96DL1 559 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 SCYL1Q96KG9 808 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 A0A1B0GX78 115 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 HYKKA2RU49 373 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 TXNDC9O14530 226 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 RSL1D1O76021 490 aaKnown RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 ALBP02768 609 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 S100BP04271 92 aaPredicted RBP10.05□□□□□ -0.8
NUP98-205ENST00000397007 IFI6P09912 130 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 RHAGQ02094 409 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 ABHD18Q0P651 414 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 DSG2Q14126 1118 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 PRMT9Q6P2P2 845 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 PPP1R3BQ86XI6 285 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 CSNK1A1LQ8N752 337 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 KLHL25Q9H0H3 589 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 LYRM4Q9HD34 91 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 SRPK3Q9UPE1 567 aa10.05□□□□□ -0.8
NUP98-205ENST00000397007 TRABD2BA6NFA1 517 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CPNE3O75131 537 aaKnown RBP10.04□□□□□ -0.8
NUP98-205ENST00000397007 LYPLA1O75608 230 aaPredicted RBP10.04□□□□□ -0.8
NUP98-205ENST00000397007 WT1P19544 449 aaPredicted RBP10.04□□□□□ -0.8
NUP98-205ENST00000397007 F8A1P23610 371 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 SEPHS1P49903 392 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 PRSS53Q2L4Q9 553 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 DCAF12Q5T6F0 453 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 PHF19Q5T6S3 580 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 ARMC6Q6NXE6 501 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 RIMKLAQ8IXN7 391 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CA13Q8N1Q1 262 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CCT7Q99832 543 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 ASPSCR1Q9BZE9 553 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CUTCQ9NTM9 273 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 THAP1Q9NVV9 213 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 SLC39A1Q9NY26 324 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 A8MU76 341 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 TMEM233B4DJY2 109 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 TGDSO95455 350 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 LIPCP11150 499 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 HOXB9P17482 250 aaPredicted RBP10.04□□□□□ -0.8
NUP98-205ENST00000397007 CSTF2P33240 577 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUP98-205ENST00000397007 EIF2S3P41091 472 aaKnown RBP10.04□□□□□ -0.8
NUP98-205ENST00000397007 SLC1A6P48664 564 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 PDE7AQ13946 482 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 GRM7Q14831 915 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 PAGE2BQ5JRK9 111 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 OGFOD2Q6N063 350 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 UBE2E3Q969T4 207 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 ACTL8Q9H568 366 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 RARRES3Q9UL19 164 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 SCN3AQ9NY46 2000 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 TMEM8BA6NDV4 472 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 STK17BO94768 372 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CLPSP04118 112 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 ARSFP54793 590 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 RUNX2Q13950 521 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CHI3L2Q15782 390 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 TMEM205Q6UW68 189 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 KRT78Q8N1N4 520 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 CAMKVQ8NCB2 501 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 EXT2Q93063 718 aa10.04□□□□□ -0.8
NUP98-205ENST00000397007 SRRM3A6NNA2 597 aaPredicted RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 SCRG1O75711 98 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 SUPT7LO94864 414 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 TNFSF15O95150 251 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 HBQ1P09105 142 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 SPINK2P20155 84 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 GSTM5P46439 218 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 CCNG1P51959 295 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 IRF8Q02556 426 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 TMTC4Q5T4D3 741 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 CAMKMTQ7Z624 323 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 HOXB13Q92826 284 aaPredicted RBP10.03□□□□□ -0.8
NUP98-205ENST00000397007 CMTM7Q96FZ5 175 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 TRIM4Q9C037 500 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 A0A0J9YVX5 310 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 LOC101059948A0A1B0GTJ6 334 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 AZIN1O14977 448 aa10.03□□□□□ -0.8
NUP98-205ENST00000397007 TSPAN8P19075 237 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms