RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 IRF6O14896 467 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 FCER2P06734 321 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 C7orf61Q8IZ16 206 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 METTL25Q8N6Q8 603 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 DPEP3Q9H4B8 488 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 RIMS1Q86UR5 1692 aaKnown RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 A0A1W2PQ45 241 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 A0A1W2PQY0 241 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 WNT9AO14904 365 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 VILLO15195 856 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 SLC6A6P31641 620 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 KATNBL1Q9H079 304 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 OR51I1Q9H343 314 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 TAS2R9Q9NYW1 312 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 ZNF536O15090 1300 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 SLC35F4A4IF30 521 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 FARS2O95363 451 aaKnown RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 DGKQP52824 942 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 LILRA4P59901 499 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 COL28A1Q2UY09 1125 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 SLC2A7Q6PXP3 512 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 XKR5Q6UX68 686 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 IRF2BP1Q8IU81 584 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 C2orf15Q8WU43 125 aaKnown RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 RPL10LQ96L21 214 aaKnown RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 RDH12Q96NR8 316 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 HERC2P3Q9BVR0 1158 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 SMIM30A4D0T7 59 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 CDKN1CP49918 316 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 DECR1Q16698 335 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 GTF2IRD2BQ6EKJ0 949 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 GTF2IRD2Q86UP8 949 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 ABCB8Q9NUT2 735 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 MGAT4CQ9UBM8 478 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 C12orf71A8MTZ7 269 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 INMT-MINDY4F8WBC2 141 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 BCAS2O75934 225 aaPredicted RBP13.55□□□□□ -0.24
COL4A3-202ENST00000396578 GNRHRP30968 328 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 CLRN1P58418 232 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 LRRC73Q5JTD7 316 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 POC1BQ8TC44 478 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 KLRF1Q9NZS2 232 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 ST14Q9Y5Y6 855 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 PDE4DIPQ5VU43 2346 aa13.55□□□□□ -0.24
COL4A3-202ENST00000396578 PLATP00750 562 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 DNAJB1P25685 340 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 MEDAGQ5VYS4 303 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 C7orf57Q8NEG2 295 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 PYCR2Q96C36 320 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 FCRL5Q96RD9 977 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 ERVK-18Q9QC07 812 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 EXTL2Q9UBQ6 330 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SLC22A14Q9Y267 594 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 ARID1BQ8NFD5 2236 aaPredicted RBP13.54□□□□□ -0.24
COL4A3-202ENST00000396578 A8MT66 165 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 MUSKO15146 869 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 ERI3O43414 337 aaKnown RBP13.54□□□□□ -0.24
COL4A3-202ENST00000396578 LATS1O95835 1130 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 IFNA5P01569 189 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 NDUFS1P28331 727 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 AGTR1P30556 359 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 GRIA2P42262 883 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 UFM1P61960 85 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 CYBRD1Q53TN4 286 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 BIRC7Q96CA5 298 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 C7orf34Q96L11 122 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 PBDC1Q9BVG4 233 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SLC29A3Q9BZD2 475 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 ERVK-19Q9WJR5 959 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 CHRNB2P17787 502 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 PCBP2Q15366 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL4A3-202ENST00000396578 CYP4V2Q6ZWL3 525 aaPredicted RBP13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SNX27Q96L92 541 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SLC6A7Q99884 636 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 TSSK6Q9BXA6 273 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 TPT1P8Q9HAU6 139 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SALL4Q9UJQ4 1053 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 MGAT4BQ9UQ53 548 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 CCDC58Q4VC31 144 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SIRPB2Q5JXA9 342 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 FANCFQ9NPI8 374 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 SIRPGQ9P1W8 387 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 ADGRB2O60241 1585 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 OR2B3O76000 313 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 PLGLB1Q02325 96 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 C1orf52Q8N6N3 182 aaKnown RBP13.54□□□□□ -0.24
COL4A3-202ENST00000396578 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 GPR20Q99678 358 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 A0A0G2JN53 185 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 C9J4A7 227 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 HAS3O00219 553 aa13.54□□□□□ -0.24
COL4A3-202ENST00000396578 RNF13O43567 381 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms