RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 AMER3Q8N944 861 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 TRPV3Q8NET8 790 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 OR7A2PQ8NGA2 310 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 SMIM10Q96HG1 83 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 FCRL4Q96PJ5 515 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 TEFMQ96QE5 360 aaKnown RBP12.13□□□□□ -0.47
TRIM39-204ENST00000396548 ZBTB18Q99592 522 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 RNF215Q9Y6U7 377 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 CACNA1EQ15878 2313 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 ADAMTS20P59510 1910 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 GABRR3A8MPY1 467 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 PDE5AO76074 875 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 MYO1DO94832 1006 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 LRATO95237 230 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 B3GALT4O96024 378 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 GBAP04062 536 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 KLK1P06870 262 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 EPHA8P29322 1005 aaPredicted RBP12.13□□□□□ -0.47
TRIM39-204ENST00000396548 AVPR2P30518 371 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 EPHA4P54764 986 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 PWP1Q13610 501 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 HKDC1Q2TB90 917 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 ZNF793Q6ZN11 406 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 ADCK2Q7Z695 626 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 ARHGEF39Q8N4T4 335 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 TMEM125Q96AQ2 219 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 RGMAQ96B86 450 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 PAIP1Q9H074 479 aaKnown RBP12.13□□□□□ -0.47
TRIM39-204ENST00000396548 PRDM7Q9NQW5 492 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 CMTM6Q9NX76 183 aa12.13□□□□□ -0.47
TRIM39-204ENST00000396548 LY6G6EA0A0G2JKS1 128 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PRAMEF10O60809 474 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PIM1P11309 404 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 DPY19L1Q2PZI1 675 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PRR23BQ6ZRT6 265 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SLC15A3Q8IY34 581 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 ARL10Q8N8L6 244 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 TM4SF18Q96CE8 201 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 MACROD1Q9BQ69 325 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SPAG4Q9NPE6 437 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SLC6A13Q9NSD5 602 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 DOLKQ9UPQ8 538 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 U3KQA8 63 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 RTCAO00442 366 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 NME4O00746 187 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 ZW10O43264 779 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 FURINP09958 794 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 CAPRIN1Q14444 709 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 FBXW10Q5XX13 1052 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 OR4C11Q6IEV9 310 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 ABHD17CQ6PCB6 329 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 IKBIPQ70UQ0 350 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SLC35F3Q8IY50 421 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 GFM2Q969S9 779 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 GID8Q9NWU2 228 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SLC25A37Q9NYZ2 338 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 POMPQ9Y244 141 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PRORSD1PA6NEY8 169 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 H0YHG0 523 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 ACOT8O14734 319 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 P2RX6O15547 441 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 NUDT21O43809 227 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 TMPRSS11DO60235 418 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SH3BP5O60239 455 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 TBX19O60806 448 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PVRP15151 417 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 TYRP1P17643 537 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 ACTR3P61158 418 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 SRSF11Q05519 484 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 KPNB1Q14974 876 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 MPEG1Q2M385 716 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 ZNF385BQ569K4 471 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 MRM1Q6IN84 353 aaKnown RBP12.12□□□□□ -0.47
TRIM39-204ENST00000396548 FRMPD2BQ6IN97 320 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PRMT9Q6P2P2 845 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 QRFPRQ96P65 431 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 TRAPPC9Q96Q05 1148 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 OR52E6Q96RD3 313 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 NLGN3Q9NZ94 848 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 AHSPQ9NZD4 102 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 PACSIN3Q9UKS6 424 aa12.12□□□□□ -0.47
TRIM39-204ENST00000396548 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
TRIM39-204ENST00000396548 SCELO95171 688 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 LAMP1P11279 417 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 GSTM5P46439 218 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 NFYCQ13952 458 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 ANGPT1Q15389 498 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 HLA-BQ31612 363 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 NANOGP8Q6NSW7 305 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 SLC23A3Q6PIS1 610 aa12.11□□□□□ -0.47
TRIM39-204ENST00000396548 OR2L5Q8NG80 312 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms