RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 IL4I1Q96RQ9 567 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 GSX2Q9BZM3 304 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 PIGUQ9H490 435 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 POLE3Q9NRF9 147 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 ZFP57Q9NU63 452 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 SPHK1Q9NYA1 384 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 TNFSF13BQ9Y275 285 aa8.15□□□□□ -1.1
NDE1-202ENST00000396355 LRIT2A6NDA9 550 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 TCAF2A6NFQ2 919 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 CBY3A6NI87 242 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 OR6C75A6NL08 312 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 M0R036 132 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 PPEF2O14830 753 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 TMEM127O75204 238 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 LDOC1O95751 146 aaPredicted RBP8.15□□□□□ -1.11
NDE1-202ENST00000396355 SERPINF2P08697 491 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 ZDHHC11BP0C7U3 371 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 C6P13671 934 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 WARSP23381 471 aaKnown RBP8.15□□□□□ -1.11
NDE1-202ENST00000396355 KCNJ3P48549 501 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 NRIP1P48552 1158 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 Q5BKY6 102 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 TFAP2DQ7Z6R9 452 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 CHDHQ8NE62 594 aaPredicted RBP8.15□□□□□ -1.11
NDE1-202ENST00000396355 ATP6V1C2Q8NEY4 427 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 PCDH19Q8TAB3 1148 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 DTD1Q8TEA8 209 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 PHF10Q8WUB8 498 aaKnown RBP8.15□□□□□ -1.11
NDE1-202ENST00000396355 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 SLC25A36Q96CQ1 311 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 EGLN2Q96KS0 407 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 FAM167AQ96KS9 214 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 FDXACB1Q9BRP7 624 aaPredicted RBP8.15□□□□□ -1.11
NDE1-202ENST00000396355 B3GNT5Q9BYG0 378 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 POLR2J2Q9GZM3 115 aaKnown RBP8.15□□□□□ -1.11
NDE1-202ENST00000396355 SIK2Q9H0K1 926 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 TBC1D17Q9HA65 648 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 IL23AQ9NPF7 189 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 OPTCQ9UBM4 332 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 GSTK1Q9Y2Q3 226 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 PCDHA11Q9Y5I1 949 aa8.15□□□□□ -1.11
NDE1-202ENST00000396355 IQCMA0A1B0GVH7 501 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 BRINP1O60477 761 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 RGS11O94810 467 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 CPSF4O95639 269 aaKnown RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 CA3P07451 260 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 INHBBP09529 407 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 HAPLN1P10915 354 aaPredicted RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 ARF4P18085 180 aaPredicted RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 CD9P21926 228 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 CD6P30203 668 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 ITGA1P56199 1179 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 SLC3A1Q07837 685 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 LRRC32Q14392 662 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 GINS1Q14691 196 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 SURF1Q15526 300 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 RTP2Q5QGT7 225 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 KHDRBS2Q5VWX1 349 aaKnown RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 MTFR2Q6P444 385 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 LRFN4Q6PJG9 635 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 TBPL2Q6SJ96 375 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 C5orf46Q6UWT4 87 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 RTL4Q6ZR62 310 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 RAB11FIP2Q7L804 512 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 PLPPR4Q7Z2D5 763 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 MAVSQ7Z434 540 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 FSTL5Q8N475 847 aaPredicted RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 LRRC58Q96CX6 371 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 C19orf60Q96EN9 201 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 MAP3K3Q99759 626 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 FRMD8P1Q9BZ68 369 aaPredicted RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 ABCG5Q9H222 651 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 PRO3102Q9H379 93 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 CATSPERBQ9H7T0 1116 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 NUDT15Q9NV35 164 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 ZNF639Q9UID6 485 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 FBXO5Q9UKT4 447 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 DNAJC25-GNG10A0A024R161 153 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 A0A0G2JMP0 313 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 A0A1W2PQL4 384 aaPredicted RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 MDM4O15151 490 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 ST8SIA5O15466 376 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 AP2A1O95782 977 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 SLC2A4P14672 509 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 GPD1P21695 349 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 CPT1AP50416 773 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 GP2P55259 537 aaKnown RBP8.14□□□□□ -1.11
NDE1-202ENST00000396355 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.14□□□□□ -1.11
NDE1-202ENST00000396355 INCA1Q0VD86 236 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 OLIG2Q13516 323 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 SYTL3Q4VX76 610 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 NOMO2Q5JPE7 1267 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 TMEM31Q5JXX7 168 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 ZBTB37Q5TC79 503 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 C3P1Q6ZMU1 363 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 LAX1Q8IWV1 398 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 MFSD4AQ8N468 514 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 CLEC4CQ8WTT0 213 aa8.14□□□□□ -1.11
NDE1-202ENST00000396355 MFSD3Q96ES6 412 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms