RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PTHP01270 115 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 TM4SF4P48230 202 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CRISP3P54108 245 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 EPHB3P54753 998 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 GALNT1Q10472 559 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 DBPQ10586 325 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SNAPC1Q16533 368 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 RHOXF1Q8NHV9 184 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 MGME1Q9BQP7 344 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 MROQ9BYG7 248 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ACPTQ9BZG2 426 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ZSWIM8A7E2V4 1837 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 GLOD5A6NK44 160 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CPSF4LA6NMK7 179 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 RTCAO00442 366 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 UPK1BO75841 260 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 BDKRB1P46663 353 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF140P52738 457 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 RING1Q06587 406 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SLC14A1Q13336 389 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 PRSS36Q5K4E3 855 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CPZQ66K79 652 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 C22orf42Q6IC83 251 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 ADNP2Q6IQ32 1131 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SMARCD3Q6STE5 483 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CMTM8Q8IZV2 173 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 SUN5Q8TC36 379 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 PPCDCQ96CD2 204 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CLSTN3Q9BQT9 956 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 MRPL9Q9BYD2 267 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 GPN2Q9H9Y4 310 aaPredicted RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 RLIMQ9NVW2 624 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 CLEC4EQ9ULY5 219 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 PCDHGB3Q9Y5G1 929 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 PEX16Q9Y5Y5 336 aa12.75□□□□□ -0.37
NFKB1-202ENST00000394820 TDRD15B5MCY1 1934 aaKnown RBP12.75□□□□□ -0.37
NFKB1-202ENST00000394820 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 A0A1W2PRU2 124 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF701M0R085 212 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ADAMDEC1O15204 470 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 TOXO94900 526 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 TIAL1Q01085 375 aaKnown RBP eCLIP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 HNRNPA0Q13151 305 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 TIMM50Q3ZCQ8 353 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 KLHL12Q53G59 568 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF691Q5VV52 312 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 B3GLCTQ6Y288 498 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ASCC1Q8N9N2 400 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 CRNNQ9UBG3 495 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 DYRK3O43781 588 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 NNMTP40261 264 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 MANFP55145 182 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 TLE2Q04725 743 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 C10orf62Q5T681 223 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 MTFR2Q6P444 385 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 RNF130Q86XS8 419 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 OR8J3Q8NGG0 315 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 MRPS31Q92665 395 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 FAM129BQ96TA1 746 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 TMED9Q9BVK6 235 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 SPRTNQ9H040 489 aaPredicted RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 CACYBPQ9HB71 228 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ELOVL2Q9NXB9 296 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 SARDHQ9UL12 918 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 GPR52Q9Y2T5 361 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 SAGE2PA6NJ88 616 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 GFRA2O00451 464 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 SLC28A2O43868 658 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 HTR1AP08908 422 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 CTF1Q16619 201 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 FAM26DQ5JW98 314 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 KIAA1161Q6NSJ0 714 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF544Q6NX49 715 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 ZNF461Q8TAF7 563 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 FYTTD1Q96QD9 318 aaKnown RBP12.74□□□□□ -0.37
NFKB1-202ENST00000394820 SLC35A5Q9BS91 424 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 VPS29Q9UBQ0 182 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 PLAGL1Q9UM63 463 aa12.74□□□□□ -0.37
NFKB1-202ENST00000394820 A0A1W2PPK0 400 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 BTN3A3O00478 584 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PCDH7O60245 1069 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 NME6O75414 186 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-202ENST00000394820 EPOP01588 193 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 KLK1P06870 262 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 NR2F1P10589 423 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 SDC1P18827 310 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 IQCCQ4KMZ1 466 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PPP2R2DQ66LE6 453 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 LHFPL3Q86UP9 236 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 PHYKPLQ8IUZ5 450 aa12.73□□□□□ -0.37
NFKB1-202ENST00000394820 CFAP206Q8IYR0 622 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms