RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 AAK1Q2M2I8 961 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 GPAT3Q53EU6 434 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 DUS1LQ6P1R4 473 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 PLET1Q6UQ28 207 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 DPY19L3Q6ZPD9 716 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 USP30Q70CQ3 517 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 LAPTM4BQ86VI4 370 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC22A15Q8IZD6 547 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC5A8Q8N695 610 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 AUTS2Q8WXX7 1259 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 MAL2Q969L2 176 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 IGSF21Q96ID5 467 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 DOK1Q99704 481 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 OR51B5Q9H339 312 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 CWH43Q9H720 699 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 PCDHGA10Q9Y5H3 936 aa11.25□□□□□ -0.61
UBE2D3-209ENST00000394804 A0A1W2PQ45 241 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 A0A1W2PQY0 241 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 INPPL1O15357 1258 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 ERAL1O75616 437 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 KLK1P06870 262 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CCR7P32248 378 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SPINT3P49223 89 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 DAPP51397 102 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TAS2R50P59544 299 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TMEM53Q6P2H8 277 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 MZT2AQ6P582 158 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RNF130Q86XS8 419 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SGCDQ92629 289 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 PPP1R16AQ96I34 528 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 EPYCQ99645 322 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TVP23BQ9NYZ1 205 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC30A4O14863 429 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SOD2P04179 222 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CDKN2CP42773 168 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 XKP51811 444 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 DGKEP52429 567 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 KCNC4Q03721 635 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 FAM26DQ5JW98 314 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CXorf57Q6NSI4 855 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 LINC00299Q6ZSB3 139 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SNX29P2Q8IUI4 249 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 FAM46DQ8NEK8 389 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RAD51AP1Q96B01 352 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 MGLLQ99685 303 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 UCK2Q9BZX2 261 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 IKZF5Q9H5V7 419 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 LTB4R2Q9NPC1 389 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TBC1D14Q9P2M4 693 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CASP8AP2Q9UKL3 1982 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CASKO14936 926 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 PDPK1O15530 556 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 NUAK1O60285 661 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 UGDHO60701 494 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RFPL2O75678 378 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 UPK1BO75841 260 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SNX4O95219 450 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 FGBP02675 491 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 GJA1P17302 382 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SSR2P43308 183 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 VLDLRP98155 873 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 ZXDBP98169 803 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TGM3Q08188 693 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TARDBPQ13148 414 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CDC73Q6P1J9 531 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 DENND6BQ8NEG7 585 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 FLCNQ8NFG4 579 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 PJA1Q8NG27 643 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 USP7Q93009 1102 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RNF38Q9H0F5 515 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 GPR83Q9NYM4 423 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 IL37Q9NZH6 218 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 ZNF639Q9UID6 485 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 MAN2B2Q9Y2E5 1009 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 HNRNPCL2B2RXH8 293 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 PCDH8O95206 1070 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 WISP3O95389 354 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 BMP4P12644 408 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 ETFAP13804 333 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 IDUAP35475 653 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CBX2Q14781 532 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RGNQ15493 299 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 GGTA1PQ4G0N0 100 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 ARSIQ5FYB1 569 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CEACAM20Q6UY09 585 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CEP68Q76N32 757 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 LUZP2Q86TE4 346 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CXorf40AQ8TE69 158 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 RPL3LQ92901 407 aaKnown RBP11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 PHF21AQ96BD5 680 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 PIP5K1AQ99755 562 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 MIR1-1HGQ9H1L0 117 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 SNX7Q9UNH6 387 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CORINQ9Y5Q5 1042 aa11.24□□□□□ -0.61
UBE2D3-209ENST00000394804 CLDN24A6NM45 220 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms