RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 RNF167Q9H6Y7 350 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF334Q9HCZ1 680 aaPredicted RBP17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 RLIMQ9NVW2 624 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 CD84Q9UIB8 345 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 PCDHGA2Q9Y5H1 932 aa17.66■□□□□ 0.42
PCDHA1-202ENST00000394633 TNRC18O15417 2968 aaPredicted RBP17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 UGDHO60701 494 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 SH3BGRLO75368 114 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 MTX2O75431 263 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 CTSAP10619 480 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 ERVFC1P60507 584 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF33BQ06732 778 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 DOC2AQ14183 400 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 VEPH1Q14D04 833 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 SOWAHCQ53LP3 525 aaPredicted RBP17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 CPTPQ5TA50 214 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 TPGS2Q68CL5 300 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 ADNP2Q6IQ32 1131 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 POC5Q8NA72 575 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 SPPL2AQ8TCT8 520 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF675Q8TD23 568 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF226Q9NYT6 803 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 SPASTQ9UBP0 616 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 PPIL1Q9Y3C6 166 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 UGT2A1Q9Y4X1 527 aa17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 SPTBN5Q9NRC6 3674 aaKnown RBP17.65■□□□□ 0.42
PCDHA1-202ENST00000394633 SAGE2PA6NJ88 616 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 PRRG1O14668 218 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 PCDH7O60245 1069 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 KCNK2O95069 426 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 STSP08842 583 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 SRCP12931 536 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 SPNP16150 400 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 CTNNB1P35222 781 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 HKDC1Q2TB90 917 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 TPRG1LQ5T0D9 272 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 THOC6Q86W42 341 aaKnown RBP17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 NPAS3Q8IXF0 933 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 OR10G2Q8NGC3 310 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 MCCC1Q96RQ3 725 aaPredicted RBP17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 OR51E2Q9H255 320 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 SUV39H2Q9H5I1 410 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 GPR83Q9NYM4 423 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 PCDHGA3Q9Y5H0 932 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 A3GALT2U3KPV4 340 aa17.64■□□□□ 0.42
PCDHA1-202ENST00000394633 A0A1W2PQ67 120 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 LINC01553A4QN01 128 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 HIDE1A8MVS5 230 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 OPN1SWP03999 348 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 RPLP0P05388 317 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 ADORA3P0DMS8 318 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 HLA-EP13747 358 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 GABRB1P18505 474 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 IDSP22304 550 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 PPIBP23284 216 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 GTF2E2P29084 291 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 SPINT3P49223 89 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 SELENOWP63302 87 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 CARTPTQ16568 116 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 RASGRP3Q8IV61 690 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 C1orf52Q8N6N3 182 aaKnown RBP17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 C11orf65Q8NCR3 313 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 OR4C15Q8NGM1 316 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 STARD8Q92502 1023 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 TXNDC15Q96J42 360 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 POU2F3Q9UKI9 436 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 CORO2BQ9UQ03 480 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 DENND4CQ5VZ89 1909 aa17.64■□□□□ 0.41
PCDHA1-202ENST00000394633 LOC100506127A0A0U1RQW1 187 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 TGM5O43548 720 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 PTHP01270 115 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 IDH2P48735 452 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 SNRPD1P62314 119 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 PNCKQ6P2M8 343 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 AMER2Q8N7J2 671 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 ELMO1Q92556 727 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 EFHD2Q96C19 240 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 NIPSNAP1Q9BPW8 284 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 TCF25Q9BQ70 676 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 CEP44Q9C0F1 390 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 QPCTLQ9NXS2 382 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 INSL5Q9Y5Q6 135 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 AP1M2Q9Y6Q5 423 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 PCM1Q15154 2024 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 ADAMDEC1O15204 470 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 ABCB1P08183 1280 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 ANXA4P09525 319 aaPredicted RBP17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 LIMK1P53667 647 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 CASP9P55211 416 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 COX20Q5RI15 118 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 ATAD3BQ5T9A4 648 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 ZNF852Q6ZMS4 543 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 CAMKMTQ7Z624 323 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 PARP16Q8N5Y8 322 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 OR52J3Q8NH60 311 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 BRD9Q9H8M2 597 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 SGK2Q9HBY8 427 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 GPATCH2Q9NW75 528 aa17.63■□□□□ 0.41
PCDHA1-202ENST00000394633 CCDC59Q9P031 241 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms