RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 VIPR1P32241 457 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 GPX4P36969 197 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 SNRPEP62304 92 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 RELQ04864 619 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 CAMK2GQ13555 558 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ESRP1Q6NXG1 681 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ARL6IP6Q8N6S5 226 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF548Q8NEK5 533 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 OR2T35Q8NGX2 323 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 MOSPD2Q8NHP6 518 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 PHOSPHO1Q8TCT1 267 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 WDFY2Q96P53 400 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 B3GNT5Q9BYG0 378 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 NKX6-2Q9C056 277 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 BTBD1Q9H0C5 482 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ABHD16BQ9H3Z7 469 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 NUDT15Q9NV35 164 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 SAMHD1Q9Y3Z3 626 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 TEX13CA0A0J9YWL9 993 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 SCAMP1O15126 338 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 HCN1O60741 890 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 LALBAP00709 142 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 P2RY4P51582 365 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 XKP51811 444 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 PTPN11Q06124 597 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 CAMK2DQ13557 499 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 PFKFB4Q16877 469 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 TIMM50Q3ZCQ8 353 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 COQ5Q5HYK3 327 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 CNIH2Q6PI25 160 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 B3GNT9Q6UX72 402 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 LDB1Q86U70 411 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 PIM3Q86V86 326 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 C12orf45Q8N5I9 185 aaPredicted RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 PROKR1Q8TCW9 393 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 CREB3L4Q8TEY5 395 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 FAM167AQ96KS9 214 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 C10orf90Q96M02 699 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 SARGQ9BW04 601 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 NUSAP1Q9BXS6 441 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 EIF2B3Q9NR50 452 aaKnown RBP12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ERAP1Q9NZ08 941 aa12.09□□□□□ -0.47
SLC28A1-203ENST00000394573 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 LACTBL1A8MY62 500 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 HLA-EP13747 358 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 SMPD1P17405 629 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ATP12AP54707 1039 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 TNFRSF17Q02223 184 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 OPCMLQ14982 345 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 DDI2Q5TDH0 399 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 CRTC1Q6UUV9 634 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 RAB11FIP2Q7L804 512 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 MAMDC2Q7Z304 686 aaPredicted RBP12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ZER1Q7Z7L7 766 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 SYT14Q8NB59 555 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 B3GNT7Q8NFL0 401 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 OR5T2Q8NGG2 359 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 OR9Q1Q8NGQ5 310 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 NR4A3Q92570 626 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 WNT2BQ93097 391 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 MRPS24Q96EL2 167 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 SCRN2Q96FV2 425 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 HDHD2Q9H0R4 259 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 AIG1Q9NVV5 245 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 MS4A12Q9NXJ0 267 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 TCEAL9Q9UHQ7 104 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ANXA2P2A6NMY6 339 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 CREG1O75629 220 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 IGHV2-70P01814 119 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ACSL1P33121 698 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 PCP4P48539 62 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 PIK3CGP48736 1102 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 CTBP2P56545 445 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 KCTD2Q14681 263 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 MILR1Q7Z6M3 343 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 PDZD3Q86UT5 571 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 C12orf40Q86WS4 652 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 PSTKQ8IV42 348 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 FAM181AQ8N9Y4 354 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 GMCL1Q96IK5 515 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 PFDN5Q99471 154 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 HHATLQ9HCP6 504 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ABCC13Q9NSE7 274 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 NDRG3Q9UGV2 375 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 MRTO4Q9UKD2 239 aaKnown RBP12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 ARID2Q68CP9 1835 aa12.08□□□□□ -0.48
SLC28A1-203ENST00000394573 A0A1B0GVC2 190 aa12.07□□□□□ -0.48
SLC28A1-203ENST00000394573 SLC35F4A4IF30 521 aa12.07□□□□□ -0.48
SLC28A1-203ENST00000394573 A6NIN4 97 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms