RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 GNG14A0A1W2PPG7 69 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 GRM6O15303 877 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 URODP06132 367 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 ZNF30P17039 623 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 PTX3P26022 381 aaPredicted RBP18.11■□□□□ 0.49
CBX1-202ENST00000393408 IMPA1P29218 277 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 NUDT6P53370 316 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 DCDC1P59894 354 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 TEKQ02763 1124 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 LRRC74AQ0VAA2 488 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 Q6ZVL8 140 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 OR52J3Q8NH60 311 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 GOT1L1Q8NHS2 421 aaPredicted RBP18.11■□□□□ 0.49
CBX1-202ENST00000393408 ZNF675Q8TD23 568 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 NIPSNAP1Q9BPW8 284 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 FAM83CQ9BQN1 747 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 CPNE5Q9HCH3 593 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 HMX1Q9NP08 348 aaPredicted RBP18.11■□□□□ 0.49
CBX1-202ENST00000393408 GPR83Q9NYM4 423 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 ATP6V1HQ9UI12 483 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 ZNF229Q9UJW7 825 aa18.11■□□□□ 0.49
CBX1-202ENST00000393408 PCM1Q15154 2024 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 PRAMEF25A6NGN4 478 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 FADS2P1A8MWK0 482 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 LEFTY2O00292 366 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 DSCR3O14972 297 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 SLC16A8O95907 504 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 DBTP11182 482 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 VIPR1P32241 457 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 OR1E2P47887 323 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 PREPP48147 710 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 IDH2P48735 452 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 CASP9P55211 416 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 CDH12P55289 794 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 RPS13P62277 151 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 HBA1P69905 142 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 SPIBQ01892 262 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 MICAQ29983 383 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 EXOC3L2Q2M3D2 409 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ZNF181Q2M3W8 571 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 SYTL3Q4VX76 610 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 DEFB128Q7Z7B8 93 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 LGI4Q8N135 537 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 CXorf40BQ96DE9 158 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 PKP4Q99569 1192 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 BHLHE41Q9C0J9 482 aaPredicted RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 THSD1Q9NS62 852 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ABT1Q9ULW3 272 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 UGT2A1Q9Y4X1 527 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 SAGE2PA6NJ88 616 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 NPC1O15118 1278 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 TSPAN6O43657 245 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 CATP04040 527 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 RPLP0P05388 317 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 STSP08842 583 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ADORA3P0DMS8 318 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 CTSAP10619 480 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ZNF8P17098 575 aaPredicted RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 ETV3P41162 512 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 SLC13A2Q13183 592 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 E2F2Q14209 437 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ANGPTL8Q6UXH0 198 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ZNF605Q86T29 641 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 TMC8Q8IU68 726 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 RAVER1Q8IY67 606 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 LILRA3Q8N6C8 439 aaPredicted RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 DENND6BQ8NEG7 585 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 OR4K1Q8NGD4 311 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 CD99L2Q8TCZ2 262 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 PXYLP1Q8TE99 480 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 ZNF558Q96NG5 402 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 SAMD11Q96NU1 681 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 COL21A1Q96P44 957 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 CDADC1Q9BWV3 514 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 FAM32AQ9Y421 112 aaKnown RBP18.1■□□□□ 0.49
CBX1-202ENST00000393408 PCDHGA3Q9Y5H0 932 aa18.1■□□□□ 0.49
CBX1-202ENST00000393408 HELZP42694 1942 aaKnown RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 COQ9O75208 318 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 GJA1P17302 382 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 SERPINB1P30740 379 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 LIMK1P53667 647 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 FBXO43Q4G163 708 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 GCNT6Q5T4J0 391 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 DEPDC4Q8N2C3 294 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 TRAM1L1Q8N609 369 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 AMER2Q8N7J2 671 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 TMEM159Q96B96 161 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 TIFAQ96CG3 184 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 RIOK2Q9BVS4 552 aaKnown RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 C6orf62Q9GZU0 229 aaPredicted RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 KLHL25Q9H0H3 589 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 SMG9Q9H0W8 520 aaKnown RBP18.09■□□□□ 0.49
CBX1-202ENST00000393408 REEP4Q9H6H4 257 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 PRM3Q9NNZ6 103 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 TRAV19A0A0A6YYK7 116 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 TBX1O43435 398 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 TLL1O43897 1013 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 AOC2O75106 756 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 PTHP01270 115 aa18.09■□□□□ 0.49
CBX1-202ENST00000393408 CYP2A6P11509 494 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms