RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 NOA1Q8NC60 698 aaKnown RBP0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZNRF1Q8ND25 227 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 EXOC4Q96A65 974 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 NXPE2Q96DL1 559 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 PGAM5Q96HS1 289 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 MS4A10Q96PG2 267 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 LIME1Q9H400 295 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 OPA3Q9H6K4 179 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 PREBQ9HCU5 417 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 INPP5EQ9NRR6 644 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 RRN3Q9NYV6 651 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 SLC12A6Q9UHW9 1150 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 PILRBQ9UKJ0 227 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 ABT1Q9ULW3 272 aaKnown RBP0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 NIP7Q9Y221 180 aaKnown RBP eCLIP0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 RNF123Q5XPI4 1314 aa0.54□□□□□ -2.32
RNU6-239P-201ENST00000390990 GTF3C1Q12789 2109 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 NKX6-3A6NJ46 265 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 CDRT15L2A8MXV6 281 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 PYGLP06737 847 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 CLTBP09497 229 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 DANCRP0C864 163 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 TOP1P11387 765 aaKnown RBP0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 PGAM2P15259 253 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 PPARGP37231 505 aaPredicted RBP0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 CETN2P41208 172 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 RASGEF1BQ0VAM2 473 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 C16orf72Q14CZ0 275 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 IL17AQ16552 155 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 REP15Q6BDI9 236 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 DHRS7BQ6IAN0 325 aaPredicted RBP0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 MFSD12Q6NUT3 480 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 CTR9Q6PD62 1173 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 CHST9Q7L1S5 443 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 TMEM61Q8N0U2 210 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 GPR137CQ8N3F9 429 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 ZNF397Q8NF99 534 aaPredicted RBP0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 RCHY1Q96PM5 261 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 ALKBH3Q96Q83 286 aaPredicted RBP0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 CDRT15Q96T59 188 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 SP140LQ9H930 580 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 KCNK13Q9HB14 408 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 EQTNQ9NQ60 294 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 WASH6PQ9NQA3 447 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 KLRF1Q9NZS2 232 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 FBXL4Q9UKA2 621 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 SLC13A4Q9UKG4 626 aa0.53□□□□□ -2.32
RNU6-239P-201ENST00000390990 SLIT3O75094 1523 aa0.53□□□□□ -2.33
RNU6-239P-201ENST00000390990 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.33
RNU6-239P-201ENST00000390990 A0A0G2JLM5 398 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 A0A1W2PPK0 400 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 BCLAF3A2AJT9 711 aaKnown RBP0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 MYO1GB0I1T2 1018 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 FBP2O00757 339 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 PAPSS1O43252 624 aaPredicted RBP0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 TOXO94900 526 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 IGKV1D-16P01601 117 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 IGLV3-19P01714 112 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 TSTQ16762 297 aaKnown RBP0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 ECSCRQ19T08 205 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 LRRC31Q6UY01 552 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 TMTC3Q6ZXV5 915 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 NUFIP2Q7Z417 695 aaKnown RBP0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF595Q8IYB9 648 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 ADGRF2Q8IZF7 708 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF786Q8N393 782 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 WDTC1Q8N5D0 677 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 C14orf178Q8N769 122 aaPredicted RBP0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 LINC01555Q8NAE3 123 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 OR4C15Q8NGM1 316 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 SLAMF9Q96A28 289 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 IL12RB2Q99665 862 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 SLC2A11Q9BYW1 496 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 CCSER1Q9C0I3 900 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 MUC13Q9H3R2 512 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 POLKQ9UBT6 870 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 PRODH2Q9UF12 536 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 IL36AQ9UHA7 158 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 FBXO7Q9Y3I1 522 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 RUSC2Q8N2Y8 1516 aa0.52□□□□□ -2.33
RNU6-239P-201ENST00000390990 A6NLC8 198 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 A8MVM7 634 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 PPM1GO15355 546 aaPredicted RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 B4GALT2O60909 372 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 FRAT2O75474 233 aaPredicted RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 RNASEH2AO75792 299 aaKnown RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 DDX58O95786 925 aaKnown RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 HSPB1P04792 205 aaKnown RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 HSPA1AP0DMV8 641 aaKnown RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 HSPA1BP0DMV9 641 aaKnown RBP0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 SKILP12757 684 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 F3P13726 295 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 GJA1P17302 382 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 CCNE1P24864 410 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 TRPC1P48995 793 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 SLC12A3P55017 1021 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 CLDN15P56746 228 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 RIPPLY3P57055 190 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 MOBPQ13875 183 aa0.51□□□□□ -2.33
RNU6-239P-201ENST00000390990 ARMCX4Q5H9R4 360 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms