RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 SLC46A3Q7Z3Q1 461 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 NPAS3Q8IXF0 933 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 ZNF366Q8N895 744 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 B3GNT7Q8NFL0 401 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 MYDGFQ969H8 173 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 OR4K3Q96R72 315 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 SCAMP2O15127 329 aaKnown RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 ASNA1O43681 348 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 C8GP07360 202 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 PRIM2P49643 509 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 RPS13P62277 151 aaKnown RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 RAE1P78406 368 aaKnown RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 LRIT3Q3SXY7 679 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 USP45Q70EL2 814 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 USP43Q70EL4 1123 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 LSRQ86X29 649 aaPredicted RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 C2orf73Q8N5S3 287 aaPredicted RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 C2orf15Q8WU43 125 aaKnown RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 TPK1Q9H3S4 243 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 SUV39H2Q9H5I1 410 aa20.18■□□□□ 0.82
COL23A1-201ENST00000390654 FAM120CQ9NX05 1096 aaKnown RBP20.18■□□□□ 0.82
COL23A1-201ENST00000390654 CKMT1AP12532 417 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 SRCP12931 536 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 SOAT1P35610 550 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 COPZ1P61923 177 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 GDPD3Q7L5L3 318 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 FAM9CQ8IZT9 166 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 OR8H2Q8N162 312 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 C11orf65Q8NCR3 313 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 HUS1BQ8NHY5 278 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 VANGL1Q8TAA9 524 aaPredicted RBP20.17■□□□□ 0.82
COL23A1-201ENST00000390654 IGSF21Q96ID5 467 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 RAB23Q9ULC3 237 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 AP3D1O14617 1153 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 KIAA0513O60268 411 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 GREM1O60565 184 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 SLC16A8O95907 504 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 IGFBP1P08833 259 aaPredicted RBP20.17■□□□□ 0.82
COL23A1-201ENST00000390654 RGS6P49758 472 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 TMPRSS11BQ86T26 416 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 GATAD2AQ86YP4 633 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 MMP21Q8N119 569 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 RUVBL1Q9Y265 456 aaKnown RBP20.17■□□□□ 0.82
COL23A1-201ENST00000390654 IFT52Q9Y366 437 aa20.17■□□□□ 0.82
COL23A1-201ENST00000390654 TGFB1P01137 390 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 CBSLP0DN79 551 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 CBSP35520 551 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 ETV3P41162 512 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 GGTA1PQ4G0N0 100 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 C10orf62Q5T681 223 aaPredicted RBP20.16■□□□□ 0.82
COL23A1-201ENST00000390654 C1QTNF12Q5T7M4 302 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 RSBN1Q5VWQ0 802 aaPredicted RBP20.16■□□□□ 0.82
COL23A1-201ENST00000390654 BCDIN3DQ7Z5W3 292 aaKnown RBP20.16■□□□□ 0.82
COL23A1-201ENST00000390654 OR8J2Q8NGG1 315 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 TMEM169Q96HH4 297 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SRRDQ9UH36 339 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SMIM30A4D0T7 59 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SOX14O95416 240 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SELENOWP63302 87 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 LHX8Q68G74 356 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 AGTRAPQ6RW13 159 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 VPS37AQ8NEZ2 397 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 WDR20Q8TBZ3 569 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 EPYCQ99645 322 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 NUAK2Q9H093 628 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 C11orf16Q9NQ32 467 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 EHD3Q9NZN3 535 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 A0A1W2PRU2 124 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 HNMTP50135 292 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 RPS26P62854 115 aaKnown RBP20.16■□□□□ 0.82
COL23A1-201ENST00000390654 LRRC74AQ0VAA2 488 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 TBCEQ15813 527 aaPredicted RBP20.16■□□□□ 0.82
COL23A1-201ENST00000390654 RNF165Q6ZSG1 346 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SORCS1Q8WY21 1168 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 TBC1D20Q96BZ9 403 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SLC35A5Q9BS91 424 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 OR51B5Q9H339 312 aa20.16■□□□□ 0.82
COL23A1-201ENST00000390654 SCN5AQ14524 2016 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 PNMA8CA0A1B0GUJ8 204 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 KPNA5O15131 536 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 IDSP22304 550 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 PDHA2P29803 388 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 RNF130Q86XS8 419 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 WDR36Q8NI36 951 aaKnown RBP20.15■□□□□ 0.82
COL23A1-201ENST00000390654 HHIPQ96QV1 700 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 PKP4Q99569 1192 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 CNPPD1Q9BV87 410 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 PCDHGB6Q9Y5F9 930 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 PCDHGA2Q9Y5H1 932 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 C1orf226A1L170 272 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 WWP2O00308 870 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 TSPAN6O43657 245 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 NUAK1O60285 661 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 PIK3CBP42338 1070 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 SPINT3P49223 89 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 ZNF783Q6ZMS7 281 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 OR7G3Q8NG95 312 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 CEP19Q96LK0 163 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 FAM129BQ96TA1 746 aa20.15■□□□□ 0.82
COL23A1-201ENST00000390654 GABARAPL3Q9BY60 117 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms