RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 MAGEA3P43357 314 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SOX10P56693 466 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 POU6F1Q14863 301 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 TMEM201Q5SNT2 666 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 DCLRE1AQ6PJP8 1040 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 VITQ6UXI7 678 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 P4HA3Q7Z4N8 544 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 KIAA0907Q7Z7F0 614 aaPredicted RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 UNC93AQ86WB7 457 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ADGRG5Q8IZF4 528 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 PQLC3Q8N755 202 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 RPLP0P6Q8NHW5 317 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 HUS1BQ8NHY5 278 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 VPS35Q96QK1 796 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 WDR83Q9BRX9 315 aaKnown RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 KATNB1Q9BVA0 655 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ERVMER34-1Q9H9K5 563 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 FBXO5Q9UKT4 447 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 RNF6Q9Y252 685 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 NUP98P52948 1817 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ELOVL7A1L3X0 281 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ARHGEF33A8MVX0 844 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 OR7A10O76100 309 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 IFNA7P01567 189 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 FTH1P02794 183 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 RNH1P13489 461 aaKnown RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 AREGP15514 252 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 NCK1P16333 377 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 GOT1P17174 413 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 S100GP29377 79 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 FMO4P31512 558 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 PNPLA4P41247 253 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ADCYAP1R1P41586 468 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SLC1A2P43004 574 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 HSPA7P48741 367 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 PGDP52209 483 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 NKX2-5P52952 324 aaPredicted RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 PLK1P53350 603 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SOX8P57073 446 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 CDC42P60953 191 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SIM2Q14190 667 aaPredicted RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 FKBP1CQ5VVH2 108 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SIGIRRQ6IA17 410 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 DESI1Q6ICB0 168 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SLC39A4Q6P5W5 647 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 FAM171BQ6P995 826 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ENPP7Q6UWV6 458 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 FAM131AQ6UXB0 335 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ZNF813Q6ZN06 617 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 CHST15Q7LFX5 561 aaPredicted RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 SNX20Q7Z614 316 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 NOXA1Q86UR1 476 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 ZC3HC1Q86WB0 502 aaKnown RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 ZNF567Q8N184 647 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 LNX2Q8N448 690 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 PRR18Q8N4B5 295 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 FBXO15Q8NCQ5 510 aaPredicted RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 SRFBP1Q8NEF9 429 aaKnown RBP5.55□□□□□ -1.52
RFC1-202ENST00000381897 MS4A4AQ96JQ5 239 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 HSFY1Q96LI6 401 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 PPP3R2Q96LZ3 170 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 TWNKQ96RR1 684 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SEMA3CQ99985 751 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 RACGAP1Q9H0H5 632 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 MS4A5Q9H3V2 200 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 C1orf123Q9NWV4 160 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 DTLQ9NZJ0 730 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 SLC17A6Q9P2U8 582 aa5.55□□□□□ -1.52
RFC1-202ENST00000381897 OR6C70A6NIJ9 312 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 ZNF195O14628 629 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 RGS14O43566 566 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 MPZL2O60487 215 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 NDUFS3O75489 264 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 PGLSO95336 258 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 MATN4O95460 622 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 GLP2RO95838 553 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 BMP4P12644 408 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 ITGA2P17301 1181 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 ASPAP45381 313 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 RPS5P46782 204 aaKnown RBP5.54□□□□□ -1.52
RFC1-202ENST00000381897 GSK3AP49840 483 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 MANFP55145 182 aaKnown RBP5.54□□□□□ -1.52
RFC1-202ENST00000381897 HSPA14Q0VDF9 509 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 CYBRD1Q53TN4 286 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 PYDC2Q56P42 97 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 CLVS2Q5SYC1 327 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 PRAMEF8Q5VWM4 474 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 PRAMEF7Q5VXH5 474 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 FAM122CQ6P4D5 195 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 FAM92BQ6ZTR7 304 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 TIPARPQ7Z3E1 657 aaKnown RBP5.54□□□□□ -1.52
RFC1-202ENST00000381897 SZRD1Q7Z422 152 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 CLHC1Q8NHS4 586 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 Q96MT0 163 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 DHRS9Q9BPW9 319 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.54□□□□□ -1.521e-6■□□□□ 8.6
RFC1-202ENST00000381897 ZNF224Q9NZL3 707 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 PSAT1Q9Y617 370 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 ATP23Q9Y6H3 246 aa5.54□□□□□ -1.52
RFC1-202ENST00000381897 CLDN24A6NM45 220 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms