RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 GREM1O60565 184 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 C6orf47O95873 294 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 C1SP09871 688 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SOX3P41225 446 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 PIK3CBP42338 1070 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 TBCEQ15813 527 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 RNF165Q6ZSG1 346 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 WDR53Q7Z5U6 358 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SLC44A2Q8IWA5 706 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CMTM8Q8IZV2 173 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 AMER2Q8N7J2 671 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 OR8J2Q8NGG1 315 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 MYDGFQ969H8 173 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 DMRTB1Q96MA1 342 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 EPYCQ99645 322 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 GABARAPL3Q9BY60 117 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 HOXD1Q9GZZ0 328 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CHST8Q9H2A9 424 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 TPK1Q9H3S4 243 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 SP140LQ9H930 580 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 CPNE5Q9HCH3 593 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 C11orf16Q9NQ32 467 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 RNF186Q9NXI6 227 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 EHD3Q9NZN3 535 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 B4GALT6Q9UBX8 382 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 EXO1Q9UQ84 846 aaKnown RBP8.39□□□□□ -1.07
TRIM6-203ENST00000380107 TMED5Q9Y3A6 229 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 PCDHGB6Q9Y5F9 930 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 PCDHGA2Q9Y5H1 932 aa8.39□□□□□ -1.07
TRIM6-203ENST00000380107 ZNF106Q9H2Y7 1883 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 MGAT4DA6NG13 374 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 ARHGEF33A8MVX0 844 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RFXAPO00287 272 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 NUAK1O60285 661 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SOX14O95416 240 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 IGSF6O95976 241 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RPLP2P05387 115 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 ATP1B2P14415 290 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 IDSP22304 550 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RPS13P62277 151 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RPS26P62854 115 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SELENOWP63302 87 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 MTA1Q13330 715 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 IRF3Q14653 427 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 ZNF181Q2M3W8 571 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 GGTA1PQ4G0N0 100 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 C10orf62Q5T681 223 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RSBN1Q5VWQ0 802 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SLC8B1Q6J4K2 584 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 ERICH5Q6P6B1 374 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 DPY19L3Q6ZPD9 716 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 TPRG1Q6ZUI0 275 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 NPAS3Q8IXF0 933 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 OR8H2Q8N162 312 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CHCHD4Q8N4Q1 142 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PCSK9Q8NBP7 692 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 OR2AP1Q8NGE2 309 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 HUS1BQ8NHY5 278 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 WDR20Q8TBZ3 569 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 TXNDC15Q96J42 360 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SDHCQ99643 169 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CTRCQ99895 268 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CNPPD1Q9BV87 410 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 ABCB8Q9NUT2 735 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 FAM120CQ9NX05 1096 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 FBXL12Q9NXK8 326 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SH2B3Q9UQQ2 575 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PRAMEF33A0A0G2JMD5 474 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PNMA8CA0A1B0GUJ8 204 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PRAMEF10O60809 474 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CCNKO75909 580 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SLC16A8O95907 504 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 TGFB1P01137 390 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CKMP06732 381 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 C8GP07360 202 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SRCP12931 536 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CYP2A7P20853 494 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CA8P35219 290 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 TUBA1BP68363 451 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 MXD1Q05195 221 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 CDC20Q12834 499 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PTGES3Q15185 160 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PRSS53Q2L4Q9 553 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 BCL7AQ4VC05 210 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 LYPLAL1Q5VWZ2 237 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PNCKQ6P2M8 343 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 LINC00299Q6ZSB3 139 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 Q6ZVL8 140 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 Q6ZVU0 165 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 TUBA1AQ71U36 451 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RNF180Q86T96 592 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 RNF130Q86XS8 419 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 UBE2J2Q8N2K1 259 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 C2orf73Q8N5S3 287 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 C11orf65Q8NCR3 313 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 WDR36Q8NI36 951 aaKnown RBP8.38□□□□□ -1.07
TRIM6-203ENST00000380107 SCRN2Q96FV2 425 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 FAM129BQ96TA1 746 aa8.38□□□□□ -1.07
TRIM6-203ENST00000380107 PKP4Q99569 1192 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms