RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NCF4Q15080 339 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 ZRSR2Q15696 482 aaKnown RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 LETMD1Q6P1Q0 360 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 FRMD7Q6ZUT3 714 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 ABHD13Q7L211 337 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 SYVN1Q86TM6 617 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 METTL27Q8N6F8 245 aaPredicted RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 OR9A4Q8NGU2 314 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 ARL8AQ96BM9 186 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 MS4A6EQ96DS6 147 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 MMABQ96EY8 250 aaPredicted RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 SH3GL2Q99962 352 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 GATA5Q9BWX5 397 aaPredicted RBP17.79■□□□□ 0.44
SSU72-203ENST00000378725 SLC26A1Q9H2B4 701 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 ANKHQ9HCJ1 492 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 TRPS1Q9UHF7 1281 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 MAU2Q9Y6X3 613 aa17.79■□□□□ 0.44
SSU72-203ENST00000378725 SPTBP11277 2137 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 MDC1Q14676 2089 aaKnown RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 IGLV3-12A0A075B6K2 115 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 UQCRHLA0A096LP55 91 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 C9J4A7 227 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 FOXE1O00358 373 aaPredicted RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 UBFD1O14562 309 aaKnown RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 BPGMP07738 259 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 UQCRHP07919 91 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 DHRS4L1P0CG22 281 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 ZNF888P0CJ79 500 aaPredicted RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 PCNAP12004 261 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 HNRNPH1P31943 449 aaKnown RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 HPDP32754 393 aaPredicted RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 ARL1P40616 181 aaPredicted RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 AVPR1BP47901 424 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 PKNOX1P55347 436 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 TOR1AIP1Q5JTV8 583 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 CFAP157Q5JU67 520 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 C10orf62Q5T681 223 aaPredicted RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 MLIPQ5VWP3 458 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 NIPAL1Q6NVV3 410 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 PRSS41Q7RTY9 318 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 PDSS2Q86YH6 399 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 ENDOVQ8N8Q3 282 aaKnown RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 AMER3Q8N944 861 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 OR6Y1Q8NGX8 325 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 HUS1BQ8NHY5 278 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 ZCCHC10Q8TBK6 192 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 CCT6BQ92526 530 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 COL26A1Q96A83 441 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 CNDP1Q96KN2 507 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 MECRQ9BV79 373 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 MS4A8Q9BY19 250 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 CLK4Q9HAZ1 481 aaKnown RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 KCNK9Q9NPC2 374 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 WDR70Q9NW82 654 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 GPN3Q9UHW5 284 aaPredicted RBP17.78■□□□□ 0.44
SSU72-203ENST00000378725 PPT2Q9UMR5 302 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 NAALAD2Q9Y3Q0 740 aa17.78■□□□□ 0.44
SSU72-203ENST00000378725 CHD8Q9HCK8 2581 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 VSTM2BA6NLU5 285 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 H3BQF6 201 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 GALR3O60755 368 aaPredicted RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 KLF7O75840 302 aaPredicted RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 SASH3O75995 380 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 KLHL18O94889 574 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 OR4F21O95013 312 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 ESRRBO95718 433 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 IL1RNP18510 177 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 CRTC2Q53ET0 693 aaPredicted RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 ARHGAP40Q5TG30 622 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 FRG2Q64ET8 278 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 CCDC81Q6ZN84 652 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 GPRIN3Q6ZVF9 776 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 OR2L5Q8NG80 312 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 AGAP11Q8TF27 550 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 SNRNP27Q8WVK2 155 aaKnown RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 GAL3ST3Q96A11 431 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 CMTM7Q96FZ5 175 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 FRG2BQ96QU4 278 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 REXO4Q9GZR2 422 aaKnown RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 WDR54Q9H977 334 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 DMRT3Q9NQL9 472 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 TCFL5Q9UL49 500 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 MAP4K5Q9Y4K4 846 aa17.77■□□□□ 0.44
SSU72-203ENST00000378725 MRPS18BQ9Y676 258 aaKnown RBP17.77■□□□□ 0.44
SSU72-203ENST00000378725 APC2O95996 2303 aa17.77■□□□□ 0.43
SSU72-203ENST00000378725 C4orf51C9J302 202 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 K7ENP7 123 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 SGK494L7N484 410 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 BIRC5O15392 142 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 NPHS1O60500 1241 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 CREG1O75629 220 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 TGFB1P01137 390 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 FBLP22087 321 aaKnown RBP17.76■□□□□ 0.43
SSU72-203ENST00000378725 PTX3P26022 381 aaPredicted RBP17.76■□□□□ 0.43
SSU72-203ENST00000378725 SERPINB4P48594 390 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 NEK2P51955 445 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 TMPRSS3P57727 454 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 RAB8AP61006 207 aa17.76■□□□□ 0.43
SSU72-203ENST00000378725 SLC9A5Q14940 896 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms