RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 TRIM54Q9BYV2 358 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 NSRP1Q9H0G5 558 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SOX17Q9H6I2 414 aaPredicted RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 CUTCQ9NTM9 273 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 ADAMTS6Q9UKP5 1117 aa13.1□□□□□ -0.31
PRPF18-202ENST00000378572 COPG1Q9Y678 874 aaKnown RBP13.1□□□□□ -0.31
PRPF18-202ENST00000378572 SEC16AO15027 2179 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 CCDC88CQ9P219 2028 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 ANKUB1A6NFN9 424 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 CATP04040 527 aaKnown RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 GFAPP14136 432 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 BDKRB1P46663 353 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 HERVK_113P63132 956 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 OCRLQ01968 901 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 GALNT1Q10472 559 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 AIMP2Q13155 320 aaKnown RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 GRM7Q14831 915 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 METTL2BQ6P1Q9 378 aaKnown RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 FIGLAQ6QHK4 219 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 ZCCHC23Q6ZST2 131 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 PTGR2Q8N8N7 351 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 LINC01555Q8NAE3 123 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 EXT2Q93063 718 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 FKBP10Q96AY3 582 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 TMEM237Q96Q45 408 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 TRMOQ9BU70 441 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 ERVK-6Q9BXR3 956 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 DRC3Q9H069 523 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 ZNF552Q9H707 407 aaPredicted RBP13.09□□□□□ -0.31
PRPF18-202ENST00000378572 SLC6A20Q9NP91 592 aa13.09□□□□□ -0.31
PRPF18-202ENST00000378572 DSCR3O14972 297 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 FAM107AO95990 144 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 S100BP04271 92 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 DRD4P21917 467 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 SLC1A6P48664 564 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 NAGLUP54802 743 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 VSX2P58304 361 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 ABCE1P61221 599 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 RCN2Q14257 317 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PHKG1Q16816 387 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PFKFB4Q16877 469 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TCTE1Q5JU00 501 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 ZNF678Q5SXM1 525 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 CES4AQ5XG92 561 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 SULT1C3Q6IMI6 304 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 LURAP1LQ8IV03 231 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TCAIMQ8N3R3 496 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 OR2L8Q8NGY9 312 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 MCOLN3Q8TDD5 553 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 UBTD2Q8WUN7 234 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PHF21BQ96EK2 531 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 VPS50Q96JG6 964 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 C5orf34Q96MH7 638 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 WDR77Q9BQA1 342 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 SLCO1B3Q9NPD5 702 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 AGPAT4Q9NRZ5 378 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 CD274Q9NZQ7 290 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PDE10AQ9Y233 779 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TNPO3Q9Y5L0 923 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 MAU2Q9Y6X3 613 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PABPN1LA6NDY0 278 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TGDSO95455 350 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 ANXA5P08758 320 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 HIST1H2AGP0C0S8 130 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 HIST1H2ADP20671 130 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 MMP11P24347 488 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 OR1D4P47884 311 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TSTA3Q13630 321 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PCBP2Q15366 365 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TERF2Q15554 542 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PRAMEF13Q5VWM6 474 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PARP9Q8IXQ6 854 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PRSS58Q8IYP2 241 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 RAD51AP1Q96B01 352 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 HIST1H2AHQ96KK5 128 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 CCT8L2Q96SF2 557 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 MIPEPQ99797 713 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 HIST1H2AJQ99878 128 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 H2AFJQ9BTM1 129 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 ZBTB20Q9HC78 741 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 SLC22A11Q9NSA0 550 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 FGFR1OP2Q9NVK5 253 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 CTSFQ9UBX1 484 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 HAO1Q9UJM8 370 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 PTBP2Q9UKA9 531 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 NXT1Q9UKK6 140 aaKnown RBP13.08□□□□□ -0.32
PRPF18-202ENST00000378572 SLC5A6Q9Y289 635 aa13.08□□□□□ -0.32
PRPF18-202ENST00000378572 TEX15Q9BXT5 2789 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 ARHGEF33A8MVX0 844 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 PSMB5P28074 263 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 HNMTP50135 292 aa13.07□□□□□ -0.32
PRPF18-202ENST00000378572 NKG7Q16617 165 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms