RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TGM7Q96PF1 710 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 VPS35Q96QK1 796 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 LMAN1LQ9HAT1 526 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 SPHK1Q9NYA1 384 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 TMPRSS11EQ9UL52 423 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 OR10H1Q9Y4A9 318 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 ATRXP46100 2492 aa7.79□□□□□ -1.16
CKAP2-203ENST00000378037 CDC14CA4D256 554 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 H3BSA7 217 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 HTRA2O43464 458 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 FCER2P06734 321 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF30P17039 623 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CD9P21926 228 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MMP12P39900 470 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 DNAJB13P59910 316 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 KCNAB2Q13303 367 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM196Q5HYL7 178 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 NKAIN2Q5VXU1 208 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ALG1LQ6GMV1 187 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 SYCE2Q6PIF2 218 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM107Q6UX40 140 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 B3GLCTQ6Y288 498 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 OR2I1PQ8NGU4 316 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ASB11Q8WXH4 323 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 RERGQ96A58 199 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MUS81Q96NY9 551 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ADI1Q9BV57 179 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CRISPLD2Q9H0B8 497 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MMADHCQ9H3L0 296 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CLEC4AQ9UMR7 237 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 DUSP12Q9UNI6 340 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 SLC27A6Q9Y2P4 619 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 RWDD3Q9Y3V2 267 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 J3KTA2 159 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 LSM1O15116 133 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 PFDN1O60925 122 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 EEDO75530 441 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CELA2BP08218 269 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 PIM1P11309 404 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 GSTT1P30711 240 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 RPS9P46781 194 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MAZP56270 477 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ATP1A4Q13733 1029 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM64Q6YI46 380 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 RNF111Q6ZNA4 994 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 SPATA19Q7Z5L4 167 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TRAM1L1Q8N609 369 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ZNF540Q8NDQ6 660 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 GRHL3Q8TE85 626 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 PROX1Q92786 737 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ABHD8Q96I13 439 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 C1QTNF7Q9BXJ2 289 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 C6orf106Q9H6K1 298 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MKS1Q9NXB0 559 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 AHSPQ9NZD4 102 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MYRFQ9Y2G1 1151 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 GMPPBQ9Y5P6 360 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 GAPDHSO14556 408 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CASC3O15234 703 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 PI15O43692 258 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CACNG3O60359 315 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CREG1O75629 220 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 OPN1LWP04000 364 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ASLP04424 464 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 EBLN1P0CF75 366 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 OR12D1P0DN82 309 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MAT1AQ00266 395 aaKnown RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 RHDQ02161 417 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 KCNC4Q03721 635 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 GSTA3Q16772 222 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TOR1AIP1Q5JTV8 583 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 ALKBH2Q6NS38 261 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 CPXM2Q8N436 756 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 DTX3Q8N9I9 347 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 MAGEC3Q8TD91 643 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 SGCDQ92629 289 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 DNASE1L2Q92874 299 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TMEM203Q969S6 136 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 SH3YL1Q96HL8 342 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 PLEKHA8Q96JA3 519 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 HOPXQ9BPY8 73 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 KRT84Q9NSB2 600 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 TEX10Q9NXF1 929 aaPredicted RBP7.78□□□□□ -1.16
CKAP2-203ENST00000378037 GPR45Q9Y5Y3 372 aa7.78□□□□□ -1.16
CKAP2-203ENST00000378037 A0A1W2PS29 197 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 FAM170BA6NMN3 283 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 VPS4BO75351 444 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 THEGLP0DJG4 465 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 NOS3P29474 1203 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 TAP2Q03519 686 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 MXD1Q05195 221 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 SLC14A1Q13336 389 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 EIF4EBP2Q13542 120 aaPredicted RBP7.77□□□□□ -1.17
CKAP2-203ENST00000378037 TOMM20Q15388 145 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 KLHL12Q53G59 568 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 PNCKQ6P2M8 343 aa7.77□□□□□ -1.17
CKAP2-203ENST00000378037 TRIM40Q6P9F5 258 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms