RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 METTL15A6NJ78 407 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 ANXA8P13928 327 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 EIF2DP41214 584 aaKnown RBP10.26□□□□□ -0.77
ABCF1-202ENST00000376545 FCHO2Q0JRZ9 810 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 INAVAQ3KP66 663 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 CRB2Q5IJ48 1285 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 Q6ZVU0 165 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 ANKRD33Q7Z3H0 272 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 SLC46A3Q7Z3Q1 461 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF605Q86T29 641 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 LAS2Q8IYD9 372 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 RASGEF1AQ8N9B8 481 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 DENND6BQ8NEG7 585 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 OR52N2Q8NGI0 321 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 FEVQ99581 238 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 COPS4Q9BT78 406 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 C1GALT1Q9NS00 363 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF226Q9NYT6 803 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 SPG21Q9NZD8 308 aa10.26□□□□□ -0.77
ABCF1-202ENST00000376545 TAF4O00268 1085 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TNFRSF11BO00300 401 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TGM5O43548 720 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SLC16A8O95907 504 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 VIPP01282 170 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SRPRAP08240 638 aaKnown RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TIMP2P16035 220 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TGFBR1P36897 503 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 DMC1Q14565 340 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 MICAQ29983 383 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TOR1AIP1Q5JTV8 583 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 LILRA6Q6PI73 481 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 C19orf48Q6RUI8 117 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 Q6ZVL8 140 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 MYDGFQ969H8 173 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 KCNC2Q96PR1 638 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 REEP4Q9H6H4 257 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 GULP1Q9UBP9 304 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 PAIP2BQ9ULR5 123 aaKnown RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 POFUT2Q9Y2G5 429 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 DOCK6Q96HP0 2047 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 NUP210Q8TEM1 1887 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 ISPDA4D126 451 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 CARNS1A5YM72 827 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 TSPAN6O43657 245 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 PABPC1P11940 636 aaKnown RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 C21orf33P30042 268 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 ETV3P41162 512 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 CTSCP53634 463 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 HBA1P69905 142 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 MPEG1Q2M385 716 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 COX20Q5RI15 118 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 PERM1Q5SV97 790 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 CNKSR3Q6P9H4 555 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 Q6ZPB1 254 aaPredicted RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 DEFB128Q7Z7B8 93 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SNX29P2Q8IUI4 249 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 RAVER1Q8IY67 606 aaKnown RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SLC5A8Q8N695 610 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 OR4A15Q8NGL6 344 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 HCAR2Q8TDS4 363 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 ZHX1-C8orf76Q96EF9 292 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SAMD11Q96NU1 681 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 CCM2Q9BSQ5 444 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 RIOK2Q9BVS4 552 aaKnown RBP10.25□□□□□ -0.77
ABCF1-202ENST00000376545 DCSTAMPQ9H295 470 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 EPHX3Q9H6B9 360 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SP140LQ9H930 580 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 SPASTQ9UBP0 616 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 PCDHGA3Q9Y5H0 932 aa10.25□□□□□ -0.77
ABCF1-202ENST00000376545 OR2AG2A6NM03 316 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 AQP9O43315 295 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 BNIP3LO60238 219 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 PQBP1O60828 265 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 CATP04040 527 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 LAG3P18627 525 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 PCBP3P57721 371 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 RPS13P62277 151 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 NOGQ13253 232 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 EIF4HQ15056 248 aaKnown RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 FBXO43Q4G163 708 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF648Q5T619 568 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 TMEM215Q68D42 235 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ZNF852Q6ZMS4 543 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 DPPA4Q7L190 304 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 PAGE2Q7Z2X7 111 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 NANOGNBQ7Z5D8 188 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 LRRC56Q8IYG6 542 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 FOXJ1Q92949 421 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 NEIL2Q969S2 332 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 MRGPRX3Q96LB0 322 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 RLIMQ9NVW2 624 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 SCHIP1Q9P0W5 487 aaPredicted RBP10.24□□□□□ -0.77
ABCF1-202ENST00000376545 TSC22D4Q9Y3Q8 395 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 LRRK1Q38SD2 2015 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 A0A1W2PRU2 124 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 ARRDC5A6NEK1 342 aa10.24□□□□□ -0.77
ABCF1-202ENST00000376545 DSCR3O14972 297 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms