RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 HUS1BQ8NHY5 278 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 FGF13Q92913 245 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 SDCCAG3Q96C92 435 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 C11orf24Q96F05 449 aaPredicted RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 REXO5Q96IC2 774 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 MAGED4Q96JG8 741 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 ZCCHC2Q9C0B9 1178 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 TMEM245Q9H330 911 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 BRF2Q9HAW0 419 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 BTBD3Q9Y2F9 522 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 EVPLLA8MZ36 301 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 CLIC1O00299 241 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 GNGT2O14610 69 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 PAPLNO95428 1278 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 CPSF4O95639 269 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 KRT75O95678 551 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 LAMP1P11279 417 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 HSD3B1P14060 373 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 HSD3B2P26439 372 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 VBP1P61758 197 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 UBE2UQ5VVX9 321 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 LAIR2Q6ISS4 152 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 ZNF765Q7L2R6 523 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 ZDHHC13Q8IUH4 622 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 ZNF547Q8IVP9 402 aa13.45□□□□□ -0.26
MSH5-202ENST00000375740 NUP214P35658 2090 aaPredicted RBP13.45□□□□□ -0.26
MSH5-202ENST00000375740 NOTOA8MTQ0 251 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 KCNK2O95069 426 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 ALPLP05186 524 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 NPPBP16860 134 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 ZNF8P17098 575 aaPredicted RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 ENGP17813 658 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 NAT1P18440 290 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 EFNA1P20827 205 aaPredicted RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 TBPL1P62380 186 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 PPP1R8Q12972 351 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 NDUFA5Q16718 116 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 CAPN13Q6MZZ7 669 aaPredicted RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 CES5AQ6NT32 575 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 TRMT11Q7Z4G4 463 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 TMPRSS11BQ86T26 416 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 CLECL1Q8IZS7 167 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 FBXO15Q8NCQ5 510 aaPredicted RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 PSMA8Q8TAA3 256 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 CHTF18Q8WVB6 975 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 VMP1Q96GC9 406 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 SAMD11Q96NU1 681 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 SMURF2Q9HAU4 748 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 PAK1IP1Q9NWT1 392 aaPredicted RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 SH2B3Q9UQQ2 575 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 TBC1D3BA6NDS4 549 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 H0YAE9 185 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 ANXA4P09525 319 aaPredicted RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 SPNP16150 400 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 SEPHS1P49903 392 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 RPS13P62277 151 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 DPTQ07507 201 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 GTF2H3Q13889 308 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 STARD3Q14849 445 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 EIF4HQ15056 248 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 TMEM52BQ4KMG9 183 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 ZCCHC8Q6NZY4 707 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 ERN2Q76MJ5 926 aaKnown RBP13.44□□□□□ -0.26
MSH5-202ENST00000375740 AKAP14Q86UN6 197 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 HS3ST5Q8IZT8 346 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 GPR156Q8NFN8 814 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 OR8J2Q8NGG1 315 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 PYURFQ96I23 114 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 PPP1R16AQ96I34 528 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 ITM2CQ9NQX7 267 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 ABCB10Q9NRK6 738 aa13.44□□□□□ -0.26
MSH5-202ENST00000375740 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 GABRR3A8MPY1 467 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 THRBP10828 461 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 PIGAP37287 484 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 VAC14Q08AM6 782 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 E2F2Q14209 437 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 NFE2L1Q14494 772 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 MED27Q6P2C8 311 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 THAP5Q7Z6K1 395 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 SERPINA11Q86U17 422 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 MINDY2Q8NBR6 621 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 PSD4Q8NDX1 1056 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 OR9A1PQ8NGU1 263 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 METTL2AQ96IZ6 378 aaKnown RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 DUSP26Q9BV47 211 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 BTBD2Q9BX70 525 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 CCDC90BQ9GZT6 254 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 MTIF3Q9H2K0 278 aaKnown RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 MAGIXQ9H6Y5 334 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 AASDHPPTQ9NRN7 309 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 FAM120CQ9NX05 1096 aaKnown RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 MUC22E2RYF6 1773 aaPredicted RBP13.43□□□□□ -0.26
MSH5-202ENST00000375740 KCNK5O95279 499 aa13.43□□□□□ -0.26
MSH5-202ENST00000375740 CXCR2P25025 360 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms