RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 BCL2L14Q9BZR8 327 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ANKRD12Q6UB98 2062 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 C5orf51A6NDU8 294 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SC5DO75845 299 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 RNH1P13489 461 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SLX4IPQ5VYV7 408 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MARCH9Q86YJ5 346 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MAPK15Q8TD08 544 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TMEM248Q9NWD8 314 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 COPS7AQ9UBW8 275 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TTLL8A6PVC2 850 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 J3QRK9 145 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ATG12O94817 140 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 CST3P01034 146 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 M6PRP20645 277 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MLLT3P42568 568 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 FNDC3BQ53EP0 1204 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TPGS2Q68CL5 300 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 GHDCQ8N2G8 530 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SNAPC3Q92966 411 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 FBXL8Q96CD0 374 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 LPIN3Q9BQK8 851 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 CCM2Q9BSQ5 444 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 BRF2Q9HAW0 419 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 GLTPQ9NZD2 209 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 MEGF11A6BM72 1044 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 RBBP9O75884 186 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 CPN2P22792 545 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 ISLR2Q6UXK2 745 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 NUP54Q7Z3B4 507 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 CAND1Q86VP6 1230 aaKnown RBP9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TPRA1Q86W33 373 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 TFAP2BQ92481 460 aa9.87□□□□□ -0.83
PTCH1-204ENST00000375290 SMAD3P84022 425 aaKnown RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 SNTB2Q13425 540 aaKnown RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 GNMTQ14749 295 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 SLC24A5Q71RS6 500 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF550Q7Z398 422 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 PYCR2Q96C36 320 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 PCED1BQ96HM7 432 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 NELFAQ9H3P2 528 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 KLHL9Q9P2J3 617 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CPQQ9Y646 472 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 TSPAN8P19075 237 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 OGDHQ02218 1023 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 FAM86B1Q8N7N1 296 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CHDHQ8NE62 594 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 NPLOC4Q8TAT6 608 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 SH3YL1Q96HL8 342 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 FBXL20Q96IG2 436 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF558Q96NG5 402 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 TAPBPLQ9BX59 468 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 FGFBP2Q9BYJ0 223 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ADAM7Q9H2U9 754 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 WASH4PA8MWX3 477 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 B3GALT2O43825 422 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CD48P09326 243 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 TBC1D15Q8TC07 691 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 OR2M2Q96R28 347 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 AIG1Q9NVV5 245 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 AQP1P29972 269 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 NR4A2P43354 598 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 VAMP2P63027 116 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ARHGAP11AQ6P4F7 1023 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 KCTD18Q6PI47 426 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 WACQ9BTA9 647 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CHMP1AQ9HD42 196 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 TSTD3H0UI37 97 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 SDHDO14521 159 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 LATS1O95835 1130 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 IRF9Q00978 393 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 GRSF1Q12849 480 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 UGCGQ16739 394 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 LRRC28Q86X40 367 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 PIAS4Q8N2W9 510 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 GPR88Q9GZN0 384 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 IRS2Q9Y4H2 1338 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 P2RX6O15547 441 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CLDN8P56748 225 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 MEP1AQ16819 746 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF676Q8N7Q3 588 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 PNPLA2Q96AD5 504 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 AHCYL2Q96HN2 611 aaKnown RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF471Q9BX82 626 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CAPN10Q9HC96 672 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 BIN3Q9NQY0 253 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 TUBAL3A6NHL2 446 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 MANBAO00462 879 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 LYRM1O43325 122 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 MPC1LP0DKB6 136 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 IL1R2P27930 398 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 BLOC1S1P78537 153 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 CAMK2DQ13557 499 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF267Q14586 743 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.86□□□□□ -0.83
PTCH1-204ENST00000375290 COPS5Q92905 334 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 VMP1Q96GC9 406 aa9.86□□□□□ -0.83
PTCH1-204ENST00000375290 ADAM2Q99965 735 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms