RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CPB2Q96IY4 423 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 EXTL2Q9UBQ6 330 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 BTRCQ9Y297 605 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 BAATQ14032 418 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 ZNF584Q8IVC4 421 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CADM3Q8N126 398 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 OMDQ99983 421 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 LSM7Q9UK45 103 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 USP17L10C9JJH3 530 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 LAMP2P13473 410 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PTAFRP25105 342 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CD34P28906 385 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SOX9P48436 509 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CAMLGP49069 296 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 TMEM69Q5SWH9 247 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ADAMTS14Q8WXS8 1223 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 HHATLQ9HCP6 504 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 KPTNQ9Y664 436 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ZNF780AO75290 641 aaPredicted RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 PRAMEF12O95522 483 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 IL1R2P27930 398 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ABRAXAS2Q15018 415 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 GPR68Q15743 365 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 EIPR1Q53HC9 387 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 NOTUMQ6P988 496 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ADGRG2Q8IZP9 1017 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 NIPA2Q8N8Q9 360 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CGRRF1Q99675 332 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 DERAQ9Y315 318 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 hCG_1807616A0A1W2PRN6 198 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SEC14L6B5MCN3 397 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 F5H5T6 163 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 H0YIN7 160 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 NUPL2O15504 423 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 MSI1O43347 362 aaKnown RBP6.42□□□□□ -1.38
UBR4-204ENST00000375254 GZMKP49863 264 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 LAPTM4AQ15012 233 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 OR4L1Q8NH43 312 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PRRT1Q99946 306 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 IL17RBQ9NRM6 502 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SCGB2B2Q4G0G5 96 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 GK5Q6ZS86 529 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ZNF680Q8NEM1 530 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SEMA4DQ92854 862 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 SEC14L2O76054 403 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ARL2P36404 184 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 GPR1P46091 355 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ANTXR2P58335 489 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 PPP4CP60510 307 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 NSMAFQ92636 917 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 OR2AG1Q9H205 316 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 ZDHHC6Q9H6R6 413 aa6.42□□□□□ -1.38
UBR4-204ENST00000375254 CREG1O75629 220 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 TOXO94900 526 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 FUCA1P04066 466 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 TNK1Q13470 666 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 ASAH1Q13510 395 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 GRIN2CQ14957 1233 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 INTS5Q6P9B9 1019 aaKnown RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 NLRP8Q86W28 1048 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 APOBEC3FQ8IUX4 373 aaKnown RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 ZBED6CLQ96FA7 236 aaPredicted RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 SLAMF7Q9NQ25 335 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 SLC22A23A1A5C7 686 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 FAM159BA6NKW6 160 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 RNF144AP50876 292 aaPredicted RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 NPRL3Q12980 569 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 HNRNPA0Q13151 305 aaKnown RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 DUOXA1Q1HG43 343 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 FAM205BPQ63HN1 556 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 DCLRE1AQ6PJP8 1040 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 ETV3LQ6ZN32 361 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 POP1Q99575 1024 aaKnown RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 ACTRT3Q9BYD9 372 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 B3GNT4Q9C0J1 378 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 PSMD10O75832 226 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 STK17BO94768 372 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 BPIP17213 487 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 CDK5Q00535 292 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 CRB2Q5IJ48 1285 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 HGSNATQ68CP4 663 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 CNKSR3Q6P9H4 555 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 LRRC28Q86X40 367 aaPredicted RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 ENTHD1Q8IYW4 607 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 PXT1Q8NFP0 134 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 ZFP90Q8TF47 636 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 DCLRE1CQ96SD1 692 aaKnown RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 SPIN2AQ99865 258 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 SPIN2BQ9BPZ2 258 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 NKX6-2Q9C056 277 aaPredicted RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 TEX10Q9NXF1 929 aaPredicted RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 NUDT4Q9NZJ9 180 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 TRAF3IP2O43734 574 aaPredicted RBP6.41□□□□□ -1.38
UBR4-204ENST00000375254 HCKP08631 526 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 GSK3BP49841 420 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 UBXN2AP68543 259 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 CDONQ4KMG0 1287 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 GNPDA2Q8TDQ7 276 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 MICU1Q9BPX6 476 aa6.41□□□□□ -1.38
UBR4-204ENST00000375254 GORASP2Q9H8Y8 452 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms