RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 NPAS2Q99743 824 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 SLX1AQ9BQ83 275 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 UNKQ9C0B0 810 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 RAB17Q9H0T7 212 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 CLK4Q9HAZ1 481 aaKnown RBP16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 KCNE2Q9Y6J6 123 aa16.94■□□□□ 0.3
TRAPPC3-202ENST00000373162 IGKV3D-11A0A0A0MRZ8 115 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 BLACEA4D250 179 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 MAGEB17A8MXT2 336 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 FAM155BO75949 473 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 SEC24DO94855 1032 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 SERPINA6P08185 405 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 ZNF888P0CJ79 500 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 SLC35E2BP0CK96 405 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 CCDC166P0CW27 439 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 MAGEA4P43358 317 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 KCNC1P48547 511 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 AGTR2P50052 363 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 USP10Q14694 798 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 EIF2S3LQ2VIR3 472 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 ADPRMQ3LIE5 342 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 FHL5Q5TD97 284 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 VN1R5Q7Z5H4 357 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 SPATA6LQ8N4H0 392 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 CDKL2Q92772 493 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 TSLPQ969D9 159 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 TSPAN17Q96FV3 270 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 PEX11GQ96HA9 241 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 AIF1LQ9BQI0 150 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 KLHL31Q9H511 634 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 NT5DC2Q9H857 520 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 PTBP2Q9UKA9 531 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 UTP11Q9Y3A2 253 aaKnown RBP16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 DYRK1BQ9Y463 629 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 CLDN16Q9Y5I7 305 aa16.93■□□□□ 0.3
TRAPPC3-202ENST00000373162 HMX2A2RU54 273 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 PABPN1LA6NDY0 278 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 CHST10O43529 356 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 WDR47O94967 919 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 FHP07954 510 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 C1GALT1C1LP0DN25 315 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 GP1BBP13224 206 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 ICAM2P13598 275 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 CD22P20273 847 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 GLRBP48167 497 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 TDGF1P3P51864 188 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 RAB10P61026 200 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 ATP6V0D1P61421 351 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 MINDY4Q4G0A6 757 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 UBAP2Q5T6F2 1119 aaKnown RBP16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 NIPAL1Q6NVV3 410 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 ST6GALNAC3Q8NDV1 305 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 TRPV3Q8NET8 790 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 GRHL3Q8TE85 626 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 KIAA1191Q96A73 305 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 TBC1D20Q96BZ9 403 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 TAAR6Q96RI8 345 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 EGFL8Q99944 293 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 RBCK1Q9BYM8 510 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 EHD1Q9H4M9 534 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 PLA2G3Q9NZ20 509 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 GPRC5BQ9NZH0 403 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 C19orf25Q9UFG5 118 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 ASB1Q9Y576 335 aa16.92■□□□□ 0.3
TRAPPC3-202ENST00000373162 WDPCPO95876 746 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 STMN1P16949 149 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 GNAZP19086 355 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 HNRNPH1P31943 449 aaKnown RBP16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 OLR1P78380 273 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 RGS1Q08116 209 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 CDC16Q13042 620 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 NAB1Q13506 487 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 EFTUD2Q15029 972 aaKnown RBP eCLIP16.91■□□□□ 0.39e-8■■■■■ 28.3
TRAPPC3-202ENST00000373162 GRTP1Q5TC63 336 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 QSOX2Q6ZRP7 698 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 CMC1Q7Z7K0 106 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 TCAIMQ8N3R3 496 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 TBC1D19Q8N5T2 526 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 FBF1Q8TES7 1133 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 SSC4DQ8WTU2 575 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 FAR1Q8WVX9 515 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 METTL21AQ8WXB1 218 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 SEC16BQ96JE7 1060 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 QRFPRQ96P65 431 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 ATOH8Q96SQ7 321 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 MMP25Q9NPA2 562 aa16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 ERRFI1Q9UJM3 462 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC3-202ENST00000373162 ESYT3A0FGR9 886 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 ANKUB1A6NFN9 424 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 AGFG2O95081 481 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 LDLRP01130 860 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 GSTM2P28161 218 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 SPRP35270 261 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 SLC12A2P55011 1212 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 AP2B1P63010 937 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 SLBPQ14493 270 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 ABRAXAS2Q15018 415 aa16.9■□□□□ 0.3
TRAPPC3-202ENST00000373162 INAQ16352 499 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms